Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.29■□□□□ 0.36
LGR5O75473 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.29■□□□□ 0.36
LGR5O75473 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LGR5O75473 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.29■□□□□ 0.36
LGR5O75473 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.29■□□□□ 0.36
LGR5O75473 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.29■□□□□ 0.36
LGR5O75473 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.29■□□□□ 0.36
LGR5O75473 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.29■□□□□ 0.36
LGR5O75473 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGR5O75473 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGR5O75473 PCDHA1-201ENST00000378133 2726 ntBASIC17.29■□□□□ 0.36
LGR5O75473 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGR5O75473 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGR5O75473 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGR5O75473 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGR5O75473 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGR5O75473 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LGR5O75473 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.29■□□□□ 0.36
LGR5O75473 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGR5O75473 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LGR5O75473 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGR5O75473 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGR5O75473 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LGR5O75473 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.28■□□□□ 0.36
LGR5O75473 AC127383.1-201ENST00000444697 1800 ntBASIC17.28■□□□□ 0.36
LGR5O75473 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.28■□□□□ 0.36
LGR5O75473 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LGR5O75473 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LGR5O75473 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LGR5O75473 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGR5O75473 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGR5O75473 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LGR5O75473 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGR5O75473 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
LGR5O75473 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.28■□□□□ 0.36
LGR5O75473 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.28■□□□□ 0.36
LGR5O75473 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.28■□□□□ 0.36
LGR5O75473 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LGR5O75473 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.28■□□□□ 0.36
LGR5O75473 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LGR5O75473 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGR5O75473 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.28■□□□□ 0.36
LGR5O75473 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGR5O75473 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.28■□□□□ 0.36
LGR5O75473 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.28■□□□□ 0.36
LGR5O75473 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGR5O75473 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGR5O75473 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.28■□□□□ 0.36
LGR5O75473 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGR5O75473 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGR5O75473 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LGR5O75473 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGR5O75473 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.28■□□□□ 0.36
LGR5O75473 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LGR5O75473 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.28■□□□□ 0.36
LGR5O75473 AC084364.1-201ENST00000551967 1556 ntBASIC17.28■□□□□ 0.36
LGR5O75473 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.27■□□□□ 0.36
LGR5O75473 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LGR5O75473 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LGR5O75473 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LGR5O75473 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LGR5O75473 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LGR5O75473 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.27■□□□□ 0.36
LGR5O75473 AC022188.1-201ENST00000620960 1664 ntBASIC17.27■□□□□ 0.36
LGR5O75473 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.27■□□□□ 0.36
LGR5O75473 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LGR5O75473 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LGR5O75473 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LGR5O75473 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LGR5O75473 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.27■□□□□ 0.36
LGR5O75473 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.27■□□□□ 0.36
LGR5O75473 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.27■□□□□ 0.36
LGR5O75473 AC016694.1-201ENST00000434179 700 ntBASIC17.27■□□□□ 0.36
LGR5O75473 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
LGR5O75473 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.27■□□□□ 0.36
LGR5O75473 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.27■□□□□ 0.36
LGR5O75473 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.27■□□□□ 0.36
LGR5O75473 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.27■□□□□ 0.36
LGR5O75473 AC244669.2-201ENST00000612320 853 ntBASIC17.27■□□□□ 0.36
LGR5O75473 BX539320.1-201ENST00000623759 877 ntBASIC17.27■□□□□ 0.36
LGR5O75473 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LGR5O75473 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LGR5O75473 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LGR5O75473 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LGR5O75473 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LGR5O75473 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LGR5O75473 AC132872.4-202ENST00000622924 2756 ntBASIC17.27■□□□□ 0.35
LGR5O75473 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.27■□□□□ 0.35
LGR5O75473 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
LGR5O75473 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.27■□□□□ 0.35
LGR5O75473 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.27■□□□□ 0.35
LGR5O75473 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
LGR5O75473 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.26■□□□□ 0.35
LGR5O75473 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LGR5O75473 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LGR5O75473 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LGR5O75473 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LGR5O75473 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LGR5O75473 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LGR5O75473 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms