Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 TOMM22P5-201ENST00000416399 439 ntBASIC15.53■□□□□ 0.08
PCDHGA12O60330 AC099336.1-201ENST00000417053 1171 ntBASIC15.53■□□□□ 0.08
PCDHGA12O60330 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 AC245100.3-201ENST00000441281 285 ntBASIC15.53■□□□□ 0.08
PCDHGA12O60330 RPL7P3-201ENST00000441388 714 ntBASIC15.53■□□□□ 0.08
PCDHGA12O60330 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 PTP4A1P2-201ENST00000546033 454 ntBASIC15.53■□□□□ 0.08
PCDHGA12O60330 AL359711.2-201ENST00000563105 872 ntBASIC15.53■□□□□ 0.08
PCDHGA12O60330 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 MIR6787-201ENST00000616675 61 ntBASIC15.53■□□□□ 0.08
PCDHGA12O60330 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 TSPY26P-202ENST00000565928 3884 ntBASIC15.53■□□□□ 0.08
PCDHGA12O60330 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA12O60330 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGA12O60330 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA12O60330 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA12O60330 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA12O60330 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA12O60330 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA12O60330 DBET-201ENST00000630918 3363 ntBASIC15.52■□□□□ 0.08
PCDHGA12O60330 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA12O60330 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA12O60330 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PCDHGA12O60330 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA12O60330 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA12O60330 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGA12O60330 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA12O60330 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA12O60330 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PCDHGA12O60330 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGA12O60330 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA12O60330 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PCDHGA12O60330 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA12O60330 FAM21FP-201ENST00000426241 1131 ntBASIC15.52■□□□□ 0.08
PCDHGA12O60330 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA12O60330 CSF2RBP1-201ENST00000447905 391 ntBASIC15.52■□□□□ 0.08
PCDHGA12O60330 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA12O60330 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.52■□□□□ 0.08
PCDHGA12O60330 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGA12O60330 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA12O60330 AC144831.1-201ENST00000573312 2656 ntBASIC15.52■□□□□ 0.07
PCDHGA12O60330 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA12O60330 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDHGA12O60330 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.52■□□□□ 0.07
PCDHGA12O60330 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.52■□□□□ 0.07
PCDHGA12O60330 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA12O60330 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA12O60330 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDHGA12O60330 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
PCDHGA12O60330 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDHGA12O60330 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA12O60330 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
PCDHGA12O60330 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA12O60330 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA12O60330 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGA12O60330 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PCDHGA12O60330 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 KRT8P44-201ENST00000441609 1350 ntBASIC15.51■□□□□ 0.07
PCDHGA12O60330 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA12O60330 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA12O60330 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms