Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.18□□□□□ -0.46
PDE6DO43924 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PDE6DO43924 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.18□□□□□ -0.46
PDE6DO43924 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.18□□□□□ -0.46
PDE6DO43924 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.18□□□□□ -0.46
PDE6DO43924 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.18□□□□□ -0.46
PDE6DO43924 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
PDE6DO43924 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.18□□□□□ -0.46
PDE6DO43924 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.18□□□□□ -0.46
PDE6DO43924 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 AL731571.1-201ENST00000617058 5428 ntBASIC12.17□□□□□ -0.46
PDE6DO43924 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
PDE6DO43924 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
PDE6DO43924 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.17□□□□□ -0.46
PDE6DO43924 KRT18P1-202ENST00000452408 1331 ntBASIC12.17□□□□□ -0.46
PDE6DO43924 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.17□□□□□ -0.46
PDE6DO43924 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.17□□□□□ -0.46
PDE6DO43924 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.17□□□□□ -0.46
PDE6DO43924 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
PDE6DO43924 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.17□□□□□ -0.46
PDE6DO43924 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 RPL5P21-201ENST00000404620 815 ntBASIC12.17□□□□□ -0.46
PDE6DO43924 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.17□□□□□ -0.46
PDE6DO43924 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.17□□□□□ -0.46
PDE6DO43924 AC005363.2-201ENST00000618631 242 ntBASIC12.17□□□□□ -0.46
PDE6DO43924 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
PDE6DO43924 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.17□□□□□ -0.46
PDE6DO43924 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.17□□□□□ -0.46
PDE6DO43924 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.17□□□□□ -0.46
PDE6DO43924 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
PDE6DO43924 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.17□□□□□ -0.46
PDE6DO43924 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
PDE6DO43924 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
PDE6DO43924 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.17□□□□□ -0.46
PDE6DO43924 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PDE6DO43924 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
PDE6DO43924 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
PDE6DO43924 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
PDE6DO43924 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
PDE6DO43924 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.16□□□□□ -0.46
PDE6DO43924 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
PDE6DO43924 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC12.16□□□□□ -0.46
PDE6DO43924 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
PDE6DO43924 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.16□□□□□ -0.46
PDE6DO43924 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.16□□□□□ -0.46
PDE6DO43924 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
PDE6DO43924 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.16□□□□□ -0.46
PDE6DO43924 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.16□□□□□ -0.46
PDE6DO43924 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
PDE6DO43924 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 IGHV3-47-201ENST00000425060 335 ntBASIC12.16□□□□□ -0.46
PDE6DO43924 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.16□□□□□ -0.46
PDE6DO43924 DRAXINP1-201ENST00000437611 948 ntBASIC12.16□□□□□ -0.46
PDE6DO43924 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.16□□□□□ -0.46
PDE6DO43924 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.16□□□□□ -0.46
PDE6DO43924 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PDE6DO43924 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.16□□□□□ -0.46
PDE6DO43924 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.16□□□□□ -0.46
PDE6DO43924 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.16□□□□□ -0.46
PDE6DO43924 AL031055.1-201ENST00000606362 631 ntBASIC12.16□□□□□ -0.46
PDE6DO43924 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms