Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TLR4O00206 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.5■□□□□ 0.07
TLR4O00206 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.5■□□□□ 0.07
TLR4O00206 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.5■□□□□ 0.07
TLR4O00206 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TLR4O00206 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.5■□□□□ 0.07
TLR4O00206 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.5■□□□□ 0.07
TLR4O00206 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.5■□□□□ 0.07
TLR4O00206 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TLR4O00206 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.5■□□□□ 0.07
TLR4O00206 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TLR4O00206 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TLR4O00206 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.49■□□□□ 0.07
TLR4O00206 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.49■□□□□ 0.07
TLR4O00206 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.49■□□□□ 0.07
TLR4O00206 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TLR4O00206 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TLR4O00206 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TLR4O00206 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.49■□□□□ 0.07
TLR4O00206 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TLR4O00206 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.49■□□□□ 0.07
TLR4O00206 AL365203.3-201ENST00000609742 2057 ntBASIC15.49■□□□□ 0.07
TLR4O00206 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
TLR4O00206 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TLR4O00206 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.49■□□□□ 0.07
TLR4O00206 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TLR4O00206 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.49■□□□□ 0.07
TLR4O00206 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.49■□□□□ 0.07
TLR4O00206 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.49■□□□□ 0.07
TLR4O00206 RPL7P3-201ENST00000441388 714 ntBASIC15.49■□□□□ 0.07
TLR4O00206 KRT18P43-201ENST00000469825 1281 ntBASIC15.49■□□□□ 0.07
TLR4O00206 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.49■□□□□ 0.07
TLR4O00206 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.49■□□□□ 0.07
TLR4O00206 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TLR4O00206 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.49■□□□□ 0.07
TLR4O00206 AP001063.1-201ENST00000568332 529 ntBASIC15.49■□□□□ 0.07
TLR4O00206 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TLR4O00206 AC000095.1-201ENST00000603208 874 ntBASIC15.49■□□□□ 0.07
TLR4O00206 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.49■□□□□ 0.07
TLR4O00206 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TLR4O00206 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TLR4O00206 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.49■□□□□ 0.07
TLR4O00206 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TLR4O00206 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TLR4O00206 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TLR4O00206 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TLR4O00206 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TLR4O00206 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TLR4O00206 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TLR4O00206 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 AL121723.1-201ENST00000445194 1519 ntBASIC15.48■□□□□ 0.07
TLR4O00206 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.48■□□□□ 0.07
TLR4O00206 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.48■□□□□ 0.07
TLR4O00206 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TLR4O00206 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.48■□□□□ 0.07
TLR4O00206 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 LINC00554-201ENST00000564841 3011 ntBASIC15.48■□□□□ 0.07
TLR4O00206 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 AC099336.1-201ENST00000417053 1171 ntBASIC15.48■□□□□ 0.07
TLR4O00206 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.48■□□□□ 0.07
TLR4O00206 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 CSF2RBP1-201ENST00000447905 391 ntBASIC15.48■□□□□ 0.07
TLR4O00206 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 AC007551.1-201ENST00000457394 519 ntBASIC15.48■□□□□ 0.07
TLR4O00206 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.48■□□□□ 0.07
TLR4O00206 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.48■□□□□ 0.07
TLR4O00206 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.48■□□□□ 0.07
TLR4O00206 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TLR4O00206 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.48■□□□□ 0.07
TLR4O00206 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TLR4O00206 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TLR4O00206 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.48■□□□□ 0.07
TLR4O00206 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms