Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TMEM129A0AVI4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.2□□□□□ -0.14
TMEM129A0AVI4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM129A0AVI4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
TMEM129A0AVI4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM129A0AVI4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM129A0AVI4 PCDHA3-202ENST00000532566 4594 ntBASIC14.2□□□□□ -0.14
TMEM129A0AVI4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TMEM129A0AVI4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM129A0AVI4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM129A0AVI4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM129A0AVI4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
TMEM129A0AVI4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 AC073439.1-201ENST00000624121 1774 ntBASIC14.19□□□□□ -0.14
TMEM129A0AVI4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 GPS2P2-201ENST00000430745 888 ntBASIC14.19□□□□□ -0.14
TMEM129A0AVI4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 AC004449.1-201ENST00000564240 433 ntBASIC14.19□□□□□ -0.14
TMEM129A0AVI4 AC027307.2-201ENST00000591252 911 ntBASIC14.19□□□□□ -0.14
TMEM129A0AVI4 AC093028.1-201ENST00000622998 982 ntBASIC14.19□□□□□ -0.14
TMEM129A0AVI4 AC008267.7-201ENST00000624570 1194 ntBASIC14.19□□□□□ -0.14
TMEM129A0AVI4 LINC00628-201ENST00000628516 1289 ntBASIC14.19□□□□□ -0.14
TMEM129A0AVI4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM129A0AVI4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 MIR346-201ENST00000362234 95 ntBASIC14.18□□□□□ -0.14
TMEM129A0AVI4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 IGHV3-62-201ENST00000520057 340 ntBASIC14.18□□□□□ -0.14
TMEM129A0AVI4 AC243562.2-201ENST00000561247 970 ntBASIC14.18□□□□□ -0.14
TMEM129A0AVI4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM129A0AVI4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms