Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
TCRBV3S1A0A5B6 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 HNRNPDP1-201ENST00000439535 754 ntBASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 VN2R19P-201ENST00000442399 1052 ntBASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 TP73-AS1-207ENST00000624167 988 ntBASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 AC011474.4-201ENST00000623523 2076 ntBASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.64□□□□□ -0.07
TCRBV3S1A0A5B6 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 AC108751.1-201ENST00000490852 363 ntBASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 AC096734.2-201ENST00000562054 433 ntBASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRBV3S1A0A5B6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms