Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 LCK-206ENST00000373564 2137 ntTSL 5 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 AC136621.1-201ENST00000624017 2304 ntBASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 AC020658.6-201ENST00000623564 1870 ntBASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 GPS2P2-201ENST00000430745 888 ntBASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 AC007967.4-201ENST00000614700 386 ntBASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 AL691403.2-201ENST00000618460 490 ntBASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 LINC00628-201ENST00000628516 1289 ntBASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 AC092384.3-202ENST00000564646 2873 ntBASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 AC144831.1-201ENST00000573312 2656 ntBASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 DNAJB3-202ENST00000449667 1266 ntBASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 AC004449.1-201ENST00000564240 433 ntBASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 WDR88-203ENST00000592765 651 ntTSL 5 BASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 RN7SL828P-201ENST00000607615 303 ntBASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 AP001059.3-201ENST00000619053 235 ntBASIC11.4□□□□□ -0.58
TRGV1A0A0A0MS02 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms