Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 AC099336.1-201ENST00000417053 1171 ntBASIC16.21■□□□□ 0.19
HPS4Q9NQG7 SOCS2P1-201ENST00000417727 557 ntBASIC16.21■□□□□ 0.19
HPS4Q9NQG7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 CLUHP6-201ENST00000580789 941 ntBASIC16.21■□□□□ 0.19
HPS4Q9NQG7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS4Q9NQG7 AL513523.2-202ENST00000427283 2040 ntBASIC16.21■□□□□ 0.18
HPS4Q9NQG7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HPS4Q9NQG7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HPS4Q9NQG7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HPS4Q9NQG7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HPS4Q9NQG7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.21■□□□□ 0.18
HPS4Q9NQG7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
HPS4Q9NQG7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HPS4Q9NQG7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 AC005229.1-201ENST00000392885 409 ntBASIC16.2■□□□□ 0.18
HPS4Q9NQG7 C1QBPP1-201ENST00000400117 770 ntBASIC16.2■□□□□ 0.18
HPS4Q9NQG7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 RPL13AP25-201ENST00000484130 612 ntBASIC16.2■□□□□ 0.18
HPS4Q9NQG7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 PTP4A1P2-201ENST00000546033 454 ntBASIC16.2■□□□□ 0.18
HPS4Q9NQG7 AL583810.1-201ENST00000553344 1045 ntBASIC16.2■□□□□ 0.18
HPS4Q9NQG7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HPS4Q9NQG7 AC092364.2-201ENST00000596710 2692 ntBASIC16.2■□□□□ 0.18
HPS4Q9NQG7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HPS4Q9NQG7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms