Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SGCDQ92629 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
SGCDQ92629 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCDQ92629 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SGCDQ92629 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCDQ92629 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.4□□□□□ -0.1
SGCDQ92629 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCDQ92629 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCDQ92629 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCDQ92629 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCDQ92629 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCDQ92629 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCDQ92629 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
SGCDQ92629 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.4□□□□□ -0.1
SGCDQ92629 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCDQ92629 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SGCDQ92629 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SGCDQ92629 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.4□□□□□ -0.1
SGCDQ92629 AC129492.6-201ENST00000611383 1305 ntBASIC14.4□□□□□ -0.1
SGCDQ92629 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.4□□□□□ -0.1
SGCDQ92629 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SGCDQ92629 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SGCDQ92629 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SGCDQ92629 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.39□□□□□ -0.11
SGCDQ92629 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.39□□□□□ -0.11
SGCDQ92629 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.39□□□□□ -0.11
SGCDQ92629 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.39□□□□□ -0.11
SGCDQ92629 AC106795.1-205ENST00000512851 1056 ntBASIC14.39□□□□□ -0.11
SGCDQ92629 RN7SL510P-201ENST00000581311 263 ntBASIC14.39□□□□□ -0.11
SGCDQ92629 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
SGCDQ92629 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.39□□□□□ -0.11
SGCDQ92629 AL139288.1-201ENST00000623748 933 ntBASIC14.39□□□□□ -0.11
SGCDQ92629 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.39□□□□□ -0.11
SGCDQ92629 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.39□□□□□ -0.11
SGCDQ92629 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.39□□□□□ -0.11
SGCDQ92629 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 AL161772.1-201ENST00000610494 4412 ntBASIC14.39□□□□□ -0.11
SGCDQ92629 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.39□□□□□ -0.11
SGCDQ92629 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.39□□□□□ -0.11
SGCDQ92629 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.39□□□□□ -0.11
SGCDQ92629 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.39□□□□□ -0.11
SGCDQ92629 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.39□□□□□ -0.11
SGCDQ92629 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.39□□□□□ -0.11
SGCDQ92629 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SGCDQ92629 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SGCDQ92629 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SGCDQ92629 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.39□□□□□ -0.11
SGCDQ92629 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.39□□□□□ -0.11
SGCDQ92629 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SGCDQ92629 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SGCDQ92629 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SGCDQ92629 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SGCDQ92629 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SGCDQ92629 ACE3P-201ENST00000423435 1973 ntBASIC14.38□□□□□ -0.11
SGCDQ92629 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.38□□□□□ -0.11
SGCDQ92629 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SGCDQ92629 AC089987.1-201ENST00000551654 2209 ntBASIC14.38□□□□□ -0.11
SGCDQ92629 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SGCDQ92629 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SGCDQ92629 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SGCDQ92629 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SGCDQ92629 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SGCDQ92629 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
SGCDQ92629 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SGCDQ92629 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.38□□□□□ -0.11
SGCDQ92629 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.38□□□□□ -0.11
SGCDQ92629 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SGCDQ92629 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SGCDQ92629 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SGCDQ92629 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SGCDQ92629 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SGCDQ92629 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SGCDQ92629 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SGCDQ92629 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms