Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SLC38A9Q8NBW4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SLC38A9Q8NBW4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC38A9Q8NBW4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 ACKR1-201ENST00000368121 1240 ntBASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 RPL7P3-201ENST00000441388 714 ntBASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 AC022137.2-201ENST00000503482 481 ntBASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 AC244669.2-201ENST00000612320 853 ntBASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC38A9Q8NBW4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 CSF2RBP1-201ENST00000447905 391 ntBASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 AP000812.2-201ENST00000538934 718 ntBASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 AL583810.1-201ENST00000553344 1045 ntBASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 GNRHR2-203ENST00000581100 1187 ntBASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 AL138799.1-201ENST00000448213 1675 ntBASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC38A9Q8NBW4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC38A9Q8NBW4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
SLC38A9Q8NBW4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms