Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 AC145285.3-201ENST00000564603 959 ntBASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 AC087481.3-201ENST00000602886 1894 ntBASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 LINC00552-201ENST00000625151 2579 ntBASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIML2Q8N7C3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 AC112191.1-201ENST00000523689 701 ntBASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 AC104109.2-201ENST00000602919 1418 ntBASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIML2Q8N7C3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 HLA-A-201ENST00000376802 1334 ntBASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 AC074386.1-202ENST00000463561 864 ntBASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 AC024267.1-201ENST00000582320 895 ntBASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms