Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 RNU1-129P-201ENST00000384064 167 ntBASIC13.1□□□□□ -0.31
COMMD1Q8N668 AL355306.1-201ENST00000415580 579 ntBASIC13.1□□□□□ -0.31
COMMD1Q8N668 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 SPDYE11-202ENST00000450699 704 ntBASIC13.1□□□□□ -0.31
COMMD1Q8N668 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.1□□□□□ -0.31
COMMD1Q8N668 SPDYE9P-201ENST00000570642 692 ntBASIC13.1□□□□□ -0.31
COMMD1Q8N668 U1.21-201ENST00000580816 167 ntBASIC13.1□□□□□ -0.31
COMMD1Q8N668 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 SPDYE10P-202ENST00000612005 668 ntBASIC13.1□□□□□ -0.31
COMMD1Q8N668 SPDYE8P-202ENST00000612377 668 ntBASIC13.1□□□□□ -0.31
COMMD1Q8N668 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
COMMD1Q8N668 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD1Q8N668 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COMMD1Q8N668 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COMMD1Q8N668 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
COMMD1Q8N668 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
COMMD1Q8N668 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.09□□□□□ -0.31
COMMD1Q8N668 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
COMMD1Q8N668 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
COMMD1Q8N668 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
COMMD1Q8N668 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COMMD1Q8N668 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COMMD1Q8N668 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 AL596442.2-201ENST00000610240 980 ntBASIC13.09□□□□□ -0.31
COMMD1Q8N668 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.09□□□□□ -0.31
COMMD1Q8N668 AL513210.1-201ENST00000629608 234 ntBASIC13.09□□□□□ -0.31
COMMD1Q8N668 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
COMMD1Q8N668 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
COMMD1Q8N668 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COMMD1Q8N668 ST20-AS1-201ENST00000560255 4223 ntBASIC13.09□□□□□ -0.31
COMMD1Q8N668 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms