Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 BCAR1-209ENST00000546196 1340 ntBASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 AL049840.3-201ENST00000602669 611 ntBASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.61■□□□□ 0.09
NUDCD3Q8IVD9 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 RPS8P6-201ENST00000426177 609 ntBASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 AC116407.3-201ENST00000623905 1129 ntBASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 AC004877.2-201ENST00000623941 599 ntBASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
NUDCD3Q8IVD9 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms