Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 AC007541.1-201ENST00000570282 1469 ntBASIC16.62■□□□□ 0.25
MCCD1P59942 INTS4P2-202ENST00000614726 2019 ntBASIC16.62■□□□□ 0.25
MCCD1P59942 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.62■□□□□ 0.25
MCCD1P59942 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.62■□□□□ 0.25
MCCD1P59942 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 ACKR1-201ENST00000368121 1240 ntBASIC16.62■□□□□ 0.25
MCCD1P59942 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MCCD1P59942 AC236430.1-201ENST00000402231 743 ntBASIC16.62■□□□□ 0.25
MCCD1P59942 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.62■□□□□ 0.25
MCCD1P59942 AC134915.1-201ENST00000426461 574 ntBASIC16.62■□□□□ 0.25
MCCD1P59942 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.62■□□□□ 0.25
MCCD1P59942 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
MCCD1P59942 AC017007.3-201ENST00000479865 435 ntBASIC16.62■□□□□ 0.25
MCCD1P59942 ELK1P1-201ENST00000485699 580 ntBASIC16.62■□□□□ 0.25
MCCD1P59942 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.62■□□□□ 0.25
MCCD1P59942 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.62■□□□□ 0.25
MCCD1P59942 AC123567.1-201ENST00000548294 1261 ntBASIC16.62■□□□□ 0.25
MCCD1P59942 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.62■□□□□ 0.25
MCCD1P59942 TP53TG3HP-202ENST00000569755 579 ntBASIC16.62■□□□□ 0.25
MCCD1P59942 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.62■□□□□ 0.25
MCCD1P59942 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.62■□□□□ 0.25
MCCD1P59942 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.62■□□□□ 0.25
MCCD1P59942 AL132655.2-201ENST00000596276 594 ntBASIC16.62■□□□□ 0.25
MCCD1P59942 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.62■□□□□ 0.25
MCCD1P59942 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.62■□□□□ 0.25
MCCD1P59942 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.62■□□□□ 0.25
MCCD1P59942 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.62■□□□□ 0.25
MCCD1P59942 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.62■□□□□ 0.25
MCCD1P59942 AC013726.1-201ENST00000563747 2285 ntBASIC16.62■□□□□ 0.25
MCCD1P59942 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.62■□□□□ 0.25
MCCD1P59942 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.62■□□□□ 0.25
MCCD1P59942 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MCCD1P59942 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MCCD1P59942 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.61■□□□□ 0.25
MCCD1P59942 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.61■□□□□ 0.25
MCCD1P59942 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MCCD1P59942 AC103702.1-201ENST00000548801 2630 ntBASIC16.61■□□□□ 0.25
MCCD1P59942 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
MCCD1P59942 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.61■□□□□ 0.25
MCCD1P59942 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.61■□□□□ 0.25
MCCD1P59942 HMGN1P19-201ENST00000436976 333 ntBASIC16.61■□□□□ 0.25
MCCD1P59942 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.61■□□□□ 0.25
MCCD1P59942 ENPP7P5-201ENST00000541031 1031 ntBASIC16.61■□□□□ 0.25
MCCD1P59942 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.61■□□□□ 0.25
MCCD1P59942 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.61■□□□□ 0.25
MCCD1P59942 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.61■□□□□ 0.25
MCCD1P59942 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
MCCD1P59942 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.61■□□□□ 0.25
MCCD1P59942 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.61■□□□□ 0.25
MCCD1P59942 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.61■□□□□ 0.25
MCCD1P59942 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
MCCD1P59942 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.61■□□□□ 0.25
MCCD1P59942 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MCCD1P59942 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.61■□□□□ 0.25
MCCD1P59942 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MCCD1P59942 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MCCD1P59942 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
MCCD1P59942 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MCCD1P59942 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
MCCD1P59942 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MCCD1P59942 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms