Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF140P52738 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF140P52738 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ZNF140P52738 SPDYE19P-201ENST00000338590 713 ntBASIC15.53■□□□□ 0.08
ZNF140P52738 GHSR-202ENST00000427970 912 ntBASIC15.53■□□□□ 0.08
ZNF140P52738 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF140P52738 BCRP1-201ENST00000444246 691 ntBASIC15.53■□□□□ 0.08
ZNF140P52738 GNAQP1-201ENST00000444815 1067 ntBASIC15.53■□□□□ 0.08
ZNF140P52738 SPTLC1P1-201ENST00000447199 261 ntBASIC15.53■□□□□ 0.08
ZNF140P52738 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.53■□□□□ 0.08
ZNF140P52738 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF140P52738 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.53■□□□□ 0.08
ZNF140P52738 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.53■□□□□ 0.08
ZNF140P52738 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.53■□□□□ 0.08
ZNF140P52738 TPRX2P-201ENST00000535362 881 ntBASIC15.53■□□□□ 0.08
ZNF140P52738 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.53■□□□□ 0.08
ZNF140P52738 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
ZNF140P52738 AC023310.3-201ENST00000557027 670 ntBASIC15.53■□□□□ 0.08
ZNF140P52738 AC100756.1-201ENST00000562736 682 ntBASIC15.53■□□□□ 0.08
ZNF140P52738 RARRES2P5-201ENST00000564013 466 ntBASIC15.53■□□□□ 0.08
ZNF140P52738 AC138749.3-201ENST00000567691 622 ntBASIC15.53■□□□□ 0.08
ZNF140P52738 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF140P52738 AC116165.1-201ENST00000611806 668 ntBASIC15.53■□□□□ 0.08
ZNF140P52738 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
ZNF140P52738 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF140P52738 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
ZNF140P52738 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF140P52738 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF140P52738 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ZNF140P52738 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
ZNF140P52738 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF140P52738 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF140P52738 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.53■□□□□ 0.08
ZNF140P52738 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.53■□□□□ 0.08
ZNF140P52738 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF140P52738 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF140P52738 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ZNF140P52738 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF140P52738 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.53■□□□□ 0.08
ZNF140P52738 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.52■□□□□ 0.08
ZNF140P52738 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
ZNF140P52738 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.52■□□□□ 0.08
ZNF140P52738 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF140P52738 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.52■□□□□ 0.08
ZNF140P52738 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF140P52738 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF140P52738 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF140P52738 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
ZNF140P52738 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF140P52738 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.52■□□□□ 0.08
ZNF140P52738 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.52■□□□□ 0.08
ZNF140P52738 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.52■□□□□ 0.08
ZNF140P52738 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF140P52738 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF140P52738 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF140P52738 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF140P52738 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.52■□□□□ 0.08
ZNF140P52738 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF140P52738 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF140P52738 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF140P52738 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.52■□□□□ 0.08
ZNF140P52738 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF140P52738 SERBP1P5-201ENST00000510079 1181 ntBASIC15.52■□□□□ 0.08
ZNF140P52738 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.52■□□□□ 0.08
ZNF140P52738 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF140P52738 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF140P52738 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
ZNF140P52738 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.52■□□□□ 0.08
ZNF140P52738 AC009118.2-201ENST00000613275 655 ntBASIC15.52■□□□□ 0.08
ZNF140P52738 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.52■□□□□ 0.08
ZNF140P52738 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.52■□□□□ 0.08
ZNF140P52738 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF140P52738 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF140P52738 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF140P52738 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.52■□□□□ 0.07
ZNF140P52738 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
ZNF140P52738 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF140P52738 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF140P52738 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.52■□□□□ 0.07
ZNF140P52738 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF140P52738 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF140P52738 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF140P52738 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF140P52738 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF140P52738 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF140P52738 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF140P52738 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF140P52738 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF140P52738 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF140P52738 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF140P52738 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF140P52738 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.51■□□□□ 0.07
ZNF140P52738 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF140P52738 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF140P52738 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.51■□□□□ 0.07
ZNF140P52738 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ZNF140P52738 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF140P52738 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.51■□□□□ 0.07
ZNF140P52738 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF140P52738 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms