Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC3P51654 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC3P51654 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC3P51654 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC3P51654 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC3P51654 PRAL-201ENST00000624952 3286 ntBASIC17.23■□□□□ 0.35
GPC3P51654 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GPC3P51654 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GPC3P51654 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC3P51654 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GPC3P51654 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC3P51654 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC3P51654 AL133267.1-201ENST00000398220 340 ntBASIC17.23■□□□□ 0.35
GPC3P51654 C1QBPP1-201ENST00000400117 770 ntBASIC17.23■□□□□ 0.35
GPC3P51654 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.23■□□□□ 0.35
GPC3P51654 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.23■□□□□ 0.35
GPC3P51654 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.23■□□□□ 0.35
GPC3P51654 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.23■□□□□ 0.35
GPC3P51654 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC3P51654 ENPP7P5-201ENST00000541031 1031 ntBASIC17.23■□□□□ 0.35
GPC3P51654 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.23■□□□□ 0.35
GPC3P51654 BTNL10-201ENST00000595971 695 ntBASIC17.23■□□□□ 0.35
GPC3P51654 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GPC3P51654 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GPC3P51654 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GPC3P51654 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
GPC3P51654 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.23■□□□□ 0.35
GPC3P51654 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GPC3P51654 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GPC3P51654 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC3P51654 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.22■□□□□ 0.35
GPC3P51654 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC3P51654 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.22■□□□□ 0.35
GPC3P51654 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPC3P51654 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.22■□□□□ 0.35
GPC3P51654 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC3P51654 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC3P51654 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.22■□□□□ 0.35
GPC3P51654 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
GPC3P51654 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC3P51654 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
GPC3P51654 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.22■□□□□ 0.35
GPC3P51654 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.22■□□□□ 0.35
GPC3P51654 MIR1909-201ENST00000411312 80 ntBASIC17.22■□□□□ 0.35
GPC3P51654 AC022210.1-201ENST00000449856 793 ntBASIC17.22■□□□□ 0.35
GPC3P51654 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
GPC3P51654 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
GPC3P51654 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.22■□□□□ 0.35
GPC3P51654 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPC3P51654 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.22■□□□□ 0.35
GPC3P51654 AC015910.1-201ENST00000579400 975 ntBASIC17.22■□□□□ 0.35
GPC3P51654 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.22■□□□□ 0.35
GPC3P51654 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.22■□□□□ 0.35
GPC3P51654 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC3P51654 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPC3P51654 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC3P51654 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.22■□□□□ 0.35
GPC3P51654 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.22■□□□□ 0.35
GPC3P51654 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPC3P51654 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.22■□□□□ 0.35
GPC3P51654 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
GPC3P51654 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
GPC3P51654 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPC3P51654 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC3P51654 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC3P51654 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPC3P51654 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
GPC3P51654 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC3P51654 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC3P51654 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.21■□□□□ 0.35
GPC3P51654 CICP6-201ENST00000457191 2729 ntBASIC17.21■□□□□ 0.35
GPC3P51654 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
GPC3P51654 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
GPC3P51654 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC3P51654 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC3P51654 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC3P51654 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC3P51654 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC3P51654 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.21■□□□□ 0.35
GPC3P51654 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
GPC3P51654 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
GPC3P51654 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.21■□□□□ 0.35
GPC3P51654 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.21■□□□□ 0.35
GPC3P51654 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.21■□□□□ 0.35
GPC3P51654 CROCCP4-201ENST00000457096 498 ntBASIC17.21■□□□□ 0.35
GPC3P51654 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 TDH-203ENST00000531764 1110 ntBASIC17.21■□□□□ 0.35
GPC3P51654 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms