Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
RNF144AP50876 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RNF144AP50876 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
RNF144AP50876 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF144AP50876 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RNF144AP50876 AC090616.6-203ENST00000579186 1945 ntBASIC14.62□□□□□ -0.07
RNF144AP50876 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF144AP50876 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RNF144AP50876 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF144AP50876 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RNF144AP50876 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF144AP50876 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF144AP50876 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RNF144AP50876 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.62□□□□□ -0.07
RNF144AP50876 AC125807.1-201ENST00000483097 614 ntBASIC14.62□□□□□ -0.07
RNF144AP50876 HLA-J-203ENST00000494367 1087 ntBASIC14.62□□□□□ -0.07
RNF144AP50876 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 AC069262.1-201ENST00000539058 672 ntBASIC14.62□□□□□ -0.07
RNF144AP50876 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.62□□□□□ -0.07
RNF144AP50876 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RNF144AP50876 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.62□□□□□ -0.07
RNF144AP50876 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF144AP50876 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF144AP50876 AL607033.1-201ENST00000623900 1599 ntBASIC14.62□□□□□ -0.07
RNF144AP50876 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF144AP50876 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF144AP50876 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF144AP50876 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF144AP50876 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF144AP50876 TUBB3P1-201ENST00000405796 1332 ntBASIC14.62□□□□□ -0.07
RNF144AP50876 KRT18P28-201ENST00000453838 1332 ntBASIC14.62□□□□□ -0.07
RNF144AP50876 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF144AP50876 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF144AP50876 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.62□□□□□ -0.07
RNF144AP50876 AC091951.1-201ENST00000512854 2465 ntBASIC14.61□□□□□ -0.07
RNF144AP50876 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RNF144AP50876 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF144AP50876 AC087481.3-201ENST00000602886 1894 ntBASIC14.61□□□□□ -0.07
RNF144AP50876 AC020658.6-201ENST00000623564 1870 ntBASIC14.61□□□□□ -0.07
RNF144AP50876 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.61□□□□□ -0.07
RNF144AP50876 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.61□□□□□ -0.07
RNF144AP50876 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 AC105250.1-201ENST00000509378 2057 ntBASIC14.61□□□□□ -0.07
RNF144AP50876 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 TCAF2P1-201ENST00000291129 2421 ntBASIC14.61□□□□□ -0.07
RNF144AP50876 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
RNF144AP50876 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
RNF144AP50876 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.61□□□□□ -0.07
RNF144AP50876 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 SPDYE7P-202ENST00000420373 878 ntBASIC14.61□□□□□ -0.07
RNF144AP50876 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.61□□□□□ -0.07
RNF144AP50876 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RNF144AP50876 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms