Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.04■□□□□ -0
HLCSP50747 LINC02084-201ENST00000606069 1096 ntBASIC15.04■□□□□ -0
HLCSP50747 AL390754.1-201ENST00000619088 582 ntBASIC15.04■□□□□ -0
HLCSP50747 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HLCSP50747 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLCSP50747 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.04■□□□□ -0
HLCSP50747 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLCSP50747 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLCSP50747 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.04■□□□□ -0
HLCSP50747 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.04■□□□□ -0
HLCSP50747 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.04■□□□□ -0
HLCSP50747 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLCSP50747 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLCSP50747 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLCSP50747 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLCSP50747 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HLCSP50747 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.04■□□□□ -0
HLCSP50747 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.04■□□□□ -0
HLCSP50747 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
HLCSP50747 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.03■□□□□ -0
HLCSP50747 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.03■□□□□ -0
HLCSP50747 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.03■□□□□ -0
HLCSP50747 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.03■□□□□ -0
HLCSP50747 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.03■□□□□ -0
HLCSP50747 AL512638.1-201ENST00000457493 794 ntBASIC15.03■□□□□ -0
HLCSP50747 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.03■□□□□ -0
HLCSP50747 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.03■□□□□ -0
HLCSP50747 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.03■□□□□ -0
HLCSP50747 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.03■□□□□ -0
HLCSP50747 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.03■□□□□ -0
HLCSP50747 AC073592.8-201ENST00000624126 511 ntBASIC15.03■□□□□ -0
HLCSP50747 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.03■□□□□ -0
HLCSP50747 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 LINC00552-201ENST00000625151 2579 ntBASIC15.03■□□□□ -0
HLCSP50747 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.03■□□□□ -0
HLCSP50747 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.03■□□□□ -0
HLCSP50747 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HLCSP50747 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.03■□□□□ -0
HLCSP50747 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HLCSP50747 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HLCSP50747 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLCSP50747 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
HLCSP50747 AL589702.1-201ENST00000641229 1509 ntBASIC15.02■□□□□ -0
HLCSP50747 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLCSP50747 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLCSP50747 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.02■□□□□ -0
HLCSP50747 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.02■□□□□ -0
HLCSP50747 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLCSP50747 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLCSP50747 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLCSP50747 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLCSP50747 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLCSP50747 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.02■□□□□ -0
HLCSP50747 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.02■□□□□ -0
HLCSP50747 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.02■□□□□ -0
HLCSP50747 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.02■□□□□ -0
HLCSP50747 AC027369.6-201ENST00000525520 931 ntBASIC15.02■□□□□ -0
HLCSP50747 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.02■□□□□ -0
HLCSP50747 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.02■□□□□ -0
HLCSP50747 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLCSP50747 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLCSP50747 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLCSP50747 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.02□□□□□ -0.01
HLCSP50747 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLCSP50747 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.02□□□□□ -0.01
HLCSP50747 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.02□□□□□ -0.01
HLCSP50747 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLCSP50747 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLCSP50747 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLCSP50747 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLCSP50747 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLCSP50747 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLCSP50747 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.02□□□□□ -0.01
HLCSP50747 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLCSP50747 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
HLCSP50747 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HLCSP50747 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLCSP50747 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HLCSP50747 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HLCSP50747 AC013726.1-201ENST00000563747 2285 ntBASIC15.01□□□□□ -0.01
HLCSP50747 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
HLCSP50747 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms