Protein–RNA interactions for Protein: P45974

USP5, Ubiquitin carboxyl-terminal hydrolase 5, humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP5P45974 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
USP5P45974 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.64■□□□□ 0.57
USP5P45974 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP5P45974 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.64■□□□□ 0.57
USP5P45974 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.64■□□□□ 0.57
USP5P45974 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP5P45974 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP5P45974 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
USP5P45974 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP5P45974 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP5P45974 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP5P45974 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP5P45974 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.64■□□□□ 0.57
USP5P45974 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP5P45974 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP5P45974 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
USP5P45974 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
USP5P45974 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.63■□□□□ 0.57
USP5P45974 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
USP5P45974 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
USP5P45974 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.63■□□□□ 0.57
USP5P45974 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.63■□□□□ 0.57
USP5P45974 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.63■□□□□ 0.57
USP5P45974 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.63■□□□□ 0.57
USP5P45974 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.63■□□□□ 0.57
USP5P45974 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 USP32P1-208ENST00000506594 1164 ntBASIC18.63■□□□□ 0.57
USP5P45974 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
USP5P45974 SLC25A47P1-201ENST00000531577 414 ntBASIC18.63■□□□□ 0.57
USP5P45974 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.63■□□□□ 0.57
USP5P45974 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.63■□□□□ 0.57
USP5P45974 AL512343.1-201ENST00000605837 169 ntBASIC18.63■□□□□ 0.57
USP5P45974 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
USP5P45974 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.63■□□□□ 0.57
USP5P45974 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
USP5P45974 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.63■□□□□ 0.57
USP5P45974 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
USP5P45974 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP5P45974 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP5P45974 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP5P45974 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.62■□□□□ 0.57
USP5P45974 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
USP5P45974 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.62■□□□□ 0.57
USP5P45974 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP5P45974 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
USP5P45974 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
USP5P45974 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP5P45974 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP5P45974 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.62■□□□□ 0.57
USP5P45974 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.62■□□□□ 0.57
USP5P45974 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP5P45974 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.62■□□□□ 0.57
USP5P45974 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
USP5P45974 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.62■□□□□ 0.57
USP5P45974 CROCCP4-201ENST00000457096 498 ntBASIC18.62■□□□□ 0.57
USP5P45974 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
USP5P45974 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.62■□□□□ 0.57
USP5P45974 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
USP5P45974 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.62■□□□□ 0.57
USP5P45974 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.62■□□□□ 0.57
USP5P45974 AC233724.13-201ENST00000598383 410 ntBASIC18.62■□□□□ 0.57
USP5P45974 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP5P45974 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP5P45974 DRD5P1-201ENST00000456605 1438 ntBASIC18.62■□□□□ 0.57
USP5P45974 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.62■□□□□ 0.57
USP5P45974 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP5P45974 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
USP5P45974 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.62■□□□□ 0.57
USP5P45974 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
USP5P45974 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP5P45974 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP5P45974 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP5P45974 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP5P45974 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP5P45974 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.62■□□□□ 0.57
USP5P45974 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.62■□□□□ 0.57
USP5P45974 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
USP5P45974 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
USP5P45974 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
USP5P45974 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP5P45974 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP5P45974 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
USP5P45974 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.61■□□□□ 0.57
USP5P45974 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms