Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC175P0C221 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC175P0C221 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC175P0C221 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC175P0C221 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC175P0C221 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC175P0C221 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC175P0C221 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC175P0C221 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC175P0C221 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC175P0C221 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC175P0C221 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC175P0C221 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC175P0C221 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC175P0C221 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC175P0C221 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC175P0C221 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC175P0C221 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
CCDC175P0C221 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC175P0C221 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC175P0C221 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC175P0C221 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CCDC175P0C221 AC117489.1-201ENST00000625169 3217 ntBASIC16.96■□□□□ 0.31
CCDC175P0C221 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC175P0C221 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC175P0C221 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CCDC175P0C221 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC175P0C221 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.96■□□□□ 0.31
CCDC175P0C221 RPS8P6-201ENST00000426177 609 ntBASIC16.96■□□□□ 0.31
CCDC175P0C221 FAM197Y8-203ENST00000450145 560 ntBASIC16.96■□□□□ 0.31
CCDC175P0C221 AF186996.4-201ENST00000467186 377 ntBASIC16.96■□□□□ 0.31
CCDC175P0C221 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC175P0C221 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC175P0C221 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC175P0C221 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.96■□□□□ 0.31
CCDC175P0C221 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC175P0C221 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC175P0C221 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC175P0C221 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC175P0C221 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC175P0C221 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC175P0C221 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC175P0C221 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC175P0C221 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC175P0C221 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC175P0C221 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC175P0C221 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC175P0C221 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC175P0C221 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC175P0C221 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC175P0C221 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC175P0C221 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CCDC175P0C221 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC175P0C221 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC175P0C221 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC175P0C221 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC175P0C221 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC175P0C221 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC175P0C221 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC175P0C221 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC175P0C221 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC175P0C221 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC175P0C221 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC175P0C221 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC175P0C221 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC175P0C221 CRYGEP-201ENST00000412192 528 ntBASIC16.95■□□□□ 0.3
CCDC175P0C221 HCG4B-203ENST00000450128 991 ntBASIC16.95■□□□□ 0.3
CCDC175P0C221 PHKG1P2-201ENST00000457537 863 ntBASIC16.95■□□□□ 0.3
CCDC175P0C221 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC175P0C221 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC175P0C221 AC023141.13-201ENST00000604991 943 ntBASIC16.95■□□□□ 0.3
CCDC175P0C221 AC007064.4-201ENST00000637740 555 ntBASIC16.95■□□□□ 0.3
CCDC175P0C221 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC175P0C221 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC175P0C221 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC175P0C221 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CCDC175P0C221 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC175P0C221 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC175P0C221 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC175P0C221 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC175P0C221 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC175P0C221 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC175P0C221 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC175P0C221 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC175P0C221 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC175P0C221 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC175P0C221 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC175P0C221 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC175P0C221 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC175P0C221 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC175P0C221 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CCDC175P0C221 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC175P0C221 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC175P0C221 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC175P0C221 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC175P0C221 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC175P0C221 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC175P0C221 AC092910.1-201ENST00000482027 1129 ntBASIC16.94■□□□□ 0.3
CCDC175P0C221 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.94■□□□□ 0.3
CCDC175P0C221 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms