Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.46□□□□□ -0.41
IFNA1P01562 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
IFNA1P01562 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
IFNA1P01562 MBLAC2-202ENST00000514906 1936 ntBASIC12.46□□□□□ -0.42
IFNA1P01562 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
IFNA1P01562 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
IFNA1P01562 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.46□□□□□ -0.42
IFNA1P01562 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
IFNA1P01562 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
IFNA1P01562 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
IFNA1P01562 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
IFNA1P01562 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
IFNA1P01562 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
IFNA1P01562 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
IFNA1P01562 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
IFNA1P01562 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
IFNA1P01562 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
IFNA1P01562 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
IFNA1P01562 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
IFNA1P01562 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
IFNA1P01562 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.46□□□□□ -0.42
IFNA1P01562 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.45□□□□□ -0.42
IFNA1P01562 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
IFNA1P01562 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.45□□□□□ -0.42
IFNA1P01562 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.45□□□□□ -0.42
IFNA1P01562 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 AC009090.5-201ENST00000624886 2285 ntBASIC12.45□□□□□ -0.42
IFNA1P01562 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
IFNA1P01562 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.45□□□□□ -0.42
IFNA1P01562 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 AC079776.2-201ENST00000641154 1609 ntBASIC12.45□□□□□ -0.42
IFNA1P01562 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
IFNA1P01562 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 AC027601.5-201ENST00000624065 2482 ntBASIC12.45□□□□□ -0.42
IFNA1P01562 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.45□□□□□ -0.42
IFNA1P01562 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
IFNA1P01562 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.45□□□□□ -0.42
IFNA1P01562 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.45□□□□□ -0.42
IFNA1P01562 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.45□□□□□ -0.42
IFNA1P01562 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.45□□□□□ -0.42
IFNA1P01562 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 AC112907.2-201ENST00000448639 330 ntBASIC12.45□□□□□ -0.42
IFNA1P01562 TSPY20P-201ENST00000450910 630 ntBASIC12.45□□□□□ -0.42
IFNA1P01562 HOMER2P1-201ENST00000455653 964 ntBASIC12.45□□□□□ -0.42
IFNA1P01562 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
IFNA1P01562 AC008550.1-201ENST00000511500 884 ntBASIC12.45□□□□□ -0.42
IFNA1P01562 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.45□□□□□ -0.42
IFNA1P01562 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.45□□□□□ -0.42
IFNA1P01562 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.45□□□□□ -0.42
IFNA1P01562 AC011558.1-201ENST00000623459 338 ntBASIC12.45□□□□□ -0.42
IFNA1P01562 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 AC127383.1-201ENST00000444697 1800 ntBASIC12.45□□□□□ -0.42
IFNA1P01562 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 PTPRVP-205ENST00000641549 5067 ntBASIC12.45□□□□□ -0.42
IFNA1P01562 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
IFNA1P01562 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.45□□□□□ -0.42
IFNA1P01562 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
IFNA1P01562 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
IFNA1P01562 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.45□□□□□ -0.42
IFNA1P01562 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.45□□□□□ -0.42
IFNA1P01562 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
IFNA1P01562 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
IFNA1P01562 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.44□□□□□ -0.42
IFNA1P01562 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
IFNA1P01562 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms