Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.86□□□□□ -0.19
KDM4BO94953 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
KDM4BO94953 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.86□□□□□ -0.19
KDM4BO94953 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.86□□□□□ -0.19
KDM4BO94953 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.86□□□□□ -0.19
KDM4BO94953 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.86□□□□□ -0.19
KDM4BO94953 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.86□□□□□ -0.19
KDM4BO94953 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.86□□□□□ -0.19
KDM4BO94953 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.86□□□□□ -0.19
KDM4BO94953 AC107918.4-201ENST00000641966 3141 ntBASIC13.86□□□□□ -0.19
KDM4BO94953 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
KDM4BO94953 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.86□□□□□ -0.19
KDM4BO94953 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDM4BO94953 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.86□□□□□ -0.19
KDM4BO94953 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.86□□□□□ -0.19
KDM4BO94953 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDM4BO94953 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDM4BO94953 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDM4BO94953 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDM4BO94953 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
KDM4BO94953 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDM4BO94953 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDM4BO94953 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDM4BO94953 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDM4BO94953 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.86□□□□□ -0.19
KDM4BO94953 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
KDM4BO94953 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
KDM4BO94953 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDM4BO94953 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KDM4BO94953 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDM4BO94953 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.85□□□□□ -0.19
KDM4BO94953 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.85□□□□□ -0.19
KDM4BO94953 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.85□□□□□ -0.19
KDM4BO94953 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
KDM4BO94953 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.85□□□□□ -0.19
KDM4BO94953 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
KDM4BO94953 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.85□□□□□ -0.19
KDM4BO94953 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
KDM4BO94953 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
KDM4BO94953 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.85□□□□□ -0.19
KDM4BO94953 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
KDM4BO94953 AC245100.5-201ENST00000452108 331 ntBASIC13.85□□□□□ -0.19
KDM4BO94953 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.85□□□□□ -0.19
KDM4BO94953 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.85□□□□□ -0.19
KDM4BO94953 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.85□□□□□ -0.19
KDM4BO94953 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.85□□□□□ -0.19
KDM4BO94953 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.85□□□□□ -0.19
KDM4BO94953 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.85□□□□□ -0.19
KDM4BO94953 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.85□□□□□ -0.19
KDM4BO94953 AC064836.3-201ENST00000607928 673 ntBASIC13.85□□□□□ -0.19
KDM4BO94953 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
KDM4BO94953 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
KDM4BO94953 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.85□□□□□ -0.19
KDM4BO94953 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.85□□□□□ -0.19
KDM4BO94953 AC009090.5-201ENST00000624886 2285 ntBASIC13.85□□□□□ -0.19
KDM4BO94953 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.85□□□□□ -0.19
KDM4BO94953 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
KDM4BO94953 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
KDM4BO94953 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 AC112693.3-201ENST00000624819 1983 ntBASIC13.85□□□□□ -0.19
KDM4BO94953 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.85□□□□□ -0.19
KDM4BO94953 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
KDM4BO94953 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.85□□□□□ -0.19
KDM4BO94953 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
KDM4BO94953 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.85□□□□□ -0.19
KDM4BO94953 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.85□□□□□ -0.19
KDM4BO94953 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDM4BO94953 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.85□□□□□ -0.19
KDM4BO94953 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
KDM4BO94953 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
KDM4BO94953 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KDM4BO94953 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.84□□□□□ -0.19
KDM4BO94953 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KDM4BO94953 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.84□□□□□ -0.19
KDM4BO94953 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KDM4BO94953 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KDM4BO94953 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms