Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PFDN1O60925 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.96□□□□□ -0.17
PFDN1O60925 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.96□□□□□ -0.17
PFDN1O60925 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PFDN1O60925 AP000845.1-201ENST00000581677 2131 ntBASIC13.96□□□□□ -0.17
PFDN1O60925 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PFDN1O60925 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PFDN1O60925 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PFDN1O60925 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.96□□□□□ -0.17
PFDN1O60925 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.96□□□□□ -0.17
PFDN1O60925 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
PFDN1O60925 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PFDN1O60925 MIPEPP3-201ENST00000412105 444 ntBASIC13.96□□□□□ -0.17
PFDN1O60925 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.96□□□□□ -0.17
PFDN1O60925 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.96□□□□□ -0.17
PFDN1O60925 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PFDN1O60925 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.96□□□□□ -0.17
PFDN1O60925 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.96□□□□□ -0.17
PFDN1O60925 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PFDN1O60925 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PFDN1O60925 AL050303.2-201ENST00000619798 666 ntBASIC13.96□□□□□ -0.17
PFDN1O60925 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.96□□□□□ -0.17
PFDN1O60925 AD001527.2-201ENST00000622994 785 ntBASIC13.96□□□□□ -0.17
PFDN1O60925 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PFDN1O60925 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PFDN1O60925 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PFDN1O60925 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PFDN1O60925 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PFDN1O60925 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PFDN1O60925 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC13.96□□□□□ -0.17
PFDN1O60925 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PFDN1O60925 AL135905.2-201ENST00000584934 1404 ntBASIC13.96□□□□□ -0.18
PFDN1O60925 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
PFDN1O60925 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PFDN1O60925 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PFDN1O60925 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.96□□□□□ -0.18
PFDN1O60925 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.96□□□□□ -0.18
PFDN1O60925 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.96□□□□□ -0.18
PFDN1O60925 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PFDN1O60925 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.96□□□□□ -0.18
PFDN1O60925 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PFDN1O60925 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PFDN1O60925 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PFDN1O60925 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PFDN1O60925 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.95□□□□□ -0.18
PFDN1O60925 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.95□□□□□ -0.18
PFDN1O60925 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.95□□□□□ -0.18
PFDN1O60925 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PFDN1O60925 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC13.95□□□□□ -0.18
PFDN1O60925 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PFDN1O60925 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.95□□□□□ -0.18
PFDN1O60925 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
PFDN1O60925 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
PFDN1O60925 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.95□□□□□ -0.18
PFDN1O60925 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PFDN1O60925 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.95□□□□□ -0.18
PFDN1O60925 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
PFDN1O60925 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.95□□□□□ -0.18
PFDN1O60925 NIFKP9-201ENST00000419265 221 ntBASIC13.95□□□□□ -0.18
PFDN1O60925 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.95□□□□□ -0.18
PFDN1O60925 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.95□□□□□ -0.18
PFDN1O60925 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.95□□□□□ -0.18
PFDN1O60925 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.95□□□□□ -0.18
PFDN1O60925 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.95□□□□□ -0.18
PFDN1O60925 AC104390.1-201ENST00000555663 520 ntBASIC13.95□□□□□ -0.18
PFDN1O60925 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.95□□□□□ -0.18
PFDN1O60925 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.95□□□□□ -0.18
PFDN1O60925 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.95□□□□□ -0.18
PFDN1O60925 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13.95□□□□□ -0.18
PFDN1O60925 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.95□□□□□ -0.18
PFDN1O60925 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PFDN1O60925 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.95□□□□□ -0.18
PFDN1O60925 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.95□□□□□ -0.18
PFDN1O60925 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC13.95□□□□□ -0.18
PFDN1O60925 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PFDN1O60925 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PFDN1O60925 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.95□□□□□ -0.18
PFDN1O60925 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PFDN1O60925 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms