Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
RIPK2O43353 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.93■□□□□ 0.14
RIPK2O43353 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.93■□□□□ 0.14
RIPK2O43353 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.93■□□□□ 0.14
RIPK2O43353 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
RIPK2O43353 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.93■□□□□ 0.14
RIPK2O43353 AC068137.2-201ENST00000605408 478 ntBASIC15.93■□□□□ 0.14
RIPK2O43353 AC099522.2-201ENST00000607001 744 ntBASIC15.93■□□□□ 0.14
RIPK2O43353 AL773604.1-201ENST00000617417 272 ntBASIC15.93■□□□□ 0.14
RIPK2O43353 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.93■□□□□ 0.14
RIPK2O43353 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.93■□□□□ 0.14
RIPK2O43353 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.93■□□□□ 0.14
RIPK2O43353 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.93■□□□□ 0.14
RIPK2O43353 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RIPK2O43353 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.93■□□□□ 0.14
RIPK2O43353 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.93■□□□□ 0.14
RIPK2O43353 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.93■□□□□ 0.14
RIPK2O43353 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RIPK2O43353 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 LINC01230-201ENST00000625222 3017 ntBASIC15.92■□□□□ 0.14
RIPK2O43353 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.92■□□□□ 0.14
RIPK2O43353 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 MTHFR-210ENST00000641407 2387 ntBASIC15.92■□□□□ 0.14
RIPK2O43353 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RIPK2O43353 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RIPK2O43353 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RIPK2O43353 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
RIPK2O43353 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.92■□□□□ 0.14
RIPK2O43353 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.92■□□□□ 0.14
RIPK2O43353 AC136604.1-201ENST00000418535 575 ntBASIC15.92■□□□□ 0.14
RIPK2O43353 AL031284.1-201ENST00000419297 478 ntBASIC15.92■□□□□ 0.14
RIPK2O43353 AC142381.1-201ENST00000426099 345 ntBASIC15.92■□□□□ 0.14
RIPK2O43353 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.92■□□□□ 0.14
RIPK2O43353 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.92■□□□□ 0.14
RIPK2O43353 AL139010.1-201ENST00000454878 894 ntBASIC15.92■□□□□ 0.14
RIPK2O43353 IGHV3-22-201ENST00000520721 359 ntBASIC15.92■□□□□ 0.14
RIPK2O43353 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.92■□□□□ 0.14
RIPK2O43353 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.92■□□□□ 0.14
RIPK2O43353 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RIPK2O43353 AC018845.2-201ENST00000568326 409 ntBASIC15.92■□□□□ 0.14
RIPK2O43353 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.92■□□□□ 0.14
RIPK2O43353 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.92■□□□□ 0.14
RIPK2O43353 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RIPK2O43353 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.92■□□□□ 0.14
RIPK2O43353 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
RIPK2O43353 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RIPK2O43353 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.92■□□□□ 0.14
RIPK2O43353 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.91■□□□□ 0.14
RIPK2O43353 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RIPK2O43353 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.91■□□□□ 0.14
RIPK2O43353 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RIPK2O43353 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RIPK2O43353 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
RIPK2O43353 INTS4P1-203ENST00000641008 3683 ntBASIC15.91■□□□□ 0.14
RIPK2O43353 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.91■□□□□ 0.14
RIPK2O43353 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.91■□□□□ 0.14
RIPK2O43353 FAM220BP-201ENST00000377689 816 ntBASIC15.91■□□□□ 0.14
RIPK2O43353 AC002056.1-201ENST00000395613 760 ntBASIC15.91■□□□□ 0.14
RIPK2O43353 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.91■□□□□ 0.14
RIPK2O43353 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.91■□□□□ 0.14
RIPK2O43353 AC079781.3-201ENST00000449110 356 ntBASIC15.91■□□□□ 0.14
RIPK2O43353 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.91■□□□□ 0.14
RIPK2O43353 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.91■□□□□ 0.14
RIPK2O43353 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.91■□□□□ 0.14
RIPK2O43353 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms