Protein–RNA interactions for Protein: B7ZW38

HNRNPCL3, Heterogeneous nuclear ribonucleoprotein C-like 3, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL3B7ZW38 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HNRNPCL3B7ZW38 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
HNRNPCL3B7ZW38 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HNRNPCL3B7ZW38 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.6□□□□□ -0.07
HNRNPCL3B7ZW38 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HNRNPCL3B7ZW38 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HNRNPCL3B7ZW38 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HNRNPCL3B7ZW38 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HNRNPCL3B7ZW38 KRT8P12-202ENST00000472924 1397 ntBASIC14.6□□□□□ -0.07
HNRNPCL3B7ZW38 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 HIST3H2BA-201ENST00000436555 524 ntBASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 AC026150.2-201ENST00000564693 1156 ntBASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 AL133215.2-201ENST00000609242 977 ntBASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL3B7ZW38 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HNRNPCL3B7ZW38 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.58□□□□□ -0.07
HNRNPCL3B7ZW38 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HNRNPCL3B7ZW38 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HNRNPCL3B7ZW38 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HNRNPCL3B7ZW38 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HNRNPCL3B7ZW38 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 SPDYE14P-201ENST00000442619 822 ntBASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 AC112482.1-201ENST00000492080 688 ntBASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 AC009093.7-201ENST00000623853 1223 ntBASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.58□□□□□ -0.08
HNRNPCL3B7ZW38 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms