Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 SNHG9-202ENST00000564014 471 ntBASIC17.89■□□□□ 0.45
CLIC4Q9Y696 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 AF228730.6-201ENST00000641497 218 ntBASIC17.89■□□□□ 0.45
CLIC4Q9Y696 AC084121.3-201ENST00000641716 218 ntBASIC17.89■□□□□ 0.45
CLIC4Q9Y696 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 CICP23-201ENST00000605013 2741 ntBASIC17.89■□□□□ 0.45
CLIC4Q9Y696 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 AC025048.3-201ENST00000590609 569 ntBASIC17.88■□□□□ 0.45
CLIC4Q9Y696 AC005702.4-201ENST00000618393 416 ntBASIC17.88■□□□□ 0.45
CLIC4Q9Y696 SPDYE12P-201ENST00000618416 771 ntBASIC17.88■□□□□ 0.45
CLIC4Q9Y696 AL033527.5-202ENST00000641632 1098 ntBASIC17.88■□□□□ 0.45
CLIC4Q9Y696 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC4Q9Y696 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 Z97205.2-201ENST00000564697 1639 ntBASIC17.87■□□□□ 0.45
CLIC4Q9Y696 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CLIC4Q9Y696 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.86■□□□□ 0.45
CLIC4Q9Y696 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms