Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 AC096582.2-201ENST00000510860 516 ntBASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 AC126365.1-201ENST00000578585 1514 ntBASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBQLN2Q9UHD9 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.27
UBQLN2Q9UHD9 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
UBQLN2Q9UHD9 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.33□□□□□ -0.27
UBQLN2Q9UHD9 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UBQLN2Q9UHD9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UBQLN2Q9UHD9 AL512652.2-201ENST00000625156 1716 ntBASIC13.33□□□□□ -0.27
UBQLN2Q9UHD9 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
UBQLN2Q9UHD9 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
UBQLN2Q9UHD9 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
UBQLN2Q9UHD9 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
UBQLN2Q9UHD9 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UBQLN2Q9UHD9 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
UBQLN2Q9UHD9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.32□□□□□ -0.28
UBQLN2Q9UHD9 KRT8P44-201ENST00000441609 1350 ntBASIC13.32□□□□□ -0.28
UBQLN2Q9UHD9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.32□□□□□ -0.28
UBQLN2Q9UHD9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.32□□□□□ -0.28
UBQLN2Q9UHD9 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBQLN2Q9UHD9 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms