Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 TSPY26P-202ENST00000565928 3884 ntBASIC18.25■□□□□ 0.51
EFCC1Q9HA90 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 AL662890.1-201ENST00000396818 632 ntBASIC18.25■□□□□ 0.51
EFCC1Q9HA90 C1QBPP1-201ENST00000400117 770 ntBASIC18.25■□□□□ 0.51
EFCC1Q9HA90 NUS1P3-201ENST00000423502 862 ntBASIC18.25■□□□□ 0.51
EFCC1Q9HA90 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 KRT18P64-201ENST00000434946 1219 ntBASIC18.25■□□□□ 0.51
EFCC1Q9HA90 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 AC243562.2-201ENST00000561247 970 ntBASIC18.25■□□□□ 0.51
EFCC1Q9HA90 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 AC026691.1-201ENST00000602502 2017 ntBASIC18.25■□□□□ 0.51
EFCC1Q9HA90 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCC1Q9HA90 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 MSTO2P-201ENST00000314835 1709 ntBASIC18.24■□□□□ 0.51
EFCC1Q9HA90 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 HINT2P1-201ENST00000419438 481 ntBASIC18.24■□□□□ 0.51
EFCC1Q9HA90 C2orf27AP3-201ENST00000434123 579 ntBASIC18.24■□□□□ 0.51
EFCC1Q9HA90 Z93015.1-201ENST00000451718 390 ntBASIC18.24■□□□□ 0.51
EFCC1Q9HA90 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 AC105129.2-201ENST00000559536 390 ntBASIC18.24■□□□□ 0.51
EFCC1Q9HA90 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 AP001063.1-201ENST00000568332 529 ntBASIC18.24■□□□□ 0.51
EFCC1Q9HA90 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 AL354718.3-201ENST00000616414 581 ntBASIC18.24■□□□□ 0.51
EFCC1Q9HA90 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 AL008638.5-201ENST00000623814 1298 ntBASIC18.24■□□□□ 0.51
EFCC1Q9HA90 CR382287.1-201ENST00000623954 586 ntBASIC18.24■□□□□ 0.51
EFCC1Q9HA90 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 BNIP3P1-202ENST00000550043 1585 ntBASIC18.24■□□□□ 0.51
EFCC1Q9HA90 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCC1Q9HA90 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 AL592424.1-201ENST00000563624 1536 ntBASIC18.23■□□□□ 0.51
EFCC1Q9HA90 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms