Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 MST1L-201ENST00000442552 2185 ntBASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 MRPS18AP1-201ENST00000414458 589 ntBASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 GHSR-202ENST00000427970 912 ntBASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 MEIS3P1-201ENST00000495167 958 ntBASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 AC005498.2-205ENST00000593218 784 ntBASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 CICP11-201ENST00000434745 2827 ntBASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 TCAF2P1-201ENST00000291129 2421 ntBASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CCSER1Q9C0I3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 AC104457.1-201ENST00000401024 814 ntBASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 FAM8A3P-201ENST00000427218 844 ntBASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 SPDYE18-201ENST00000510091 1050 ntBASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 SRD5A3P1-201ENST00000603021 949 ntBASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CCSER1Q9C0I3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms