Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 AL607033.1-201ENST00000623900 1599 ntBASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 MIR943-201ENST00000401286 94 ntBASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 AC069120.2-201ENST00000524091 540 ntBASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 AC027369.6-201ENST00000525520 931 ntBASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 AL512361.1-201ENST00000554200 418 ntBASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.83□□□□□ -0.04
SIMC1Q8NDZ2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 AL359258.3-201ENST00000622910 2331 ntBASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 AL035633.1-201ENST00000406139 838 ntBASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 AC073592.8-201ENST00000624126 511 ntBASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 AC013268.4-201ENST00000637413 2228 ntBASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms