Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDLRAP1Q5SW96 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 AC126177.1-201ENST00000547829 2218 ntBASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 TIMM17BP1-201ENST00000545713 516 ntBASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LDLRAP1Q5SW96 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 AC009118.2-201ENST00000613275 655 ntBASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 AC004461.2-201ENST00000629517 803 ntBASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.65■□□□□ 0.1
LDLRAP1Q5SW96 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
LDLRAP1Q5SW96 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
LDLRAP1Q5SW96 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LDLRAP1Q5SW96 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDLRAP1Q5SW96 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.64■□□□□ 0.09
LDLRAP1Q5SW96 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.64■□□□□ 0.09
LDLRAP1Q5SW96 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
LDLRAP1Q5SW96 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDLRAP1Q5SW96 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.64■□□□□ 0.09
LDLRAP1Q5SW96 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDLRAP1Q5SW96 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LDLRAP1Q5SW96 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDLRAP1Q5SW96 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms