Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 CICP23-201ENST00000605013 2741 ntBASIC13.84□□□□□ -0.19
SEC61A1P61619 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SEC61A1P61619 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SEC61A1P61619 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SEC61A1P61619 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.83□□□□□ -0.19
SEC61A1P61619 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.19
SEC61A1P61619 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
SEC61A1P61619 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SEC61A1P61619 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SEC61A1P61619 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.83□□□□□ -0.19
SEC61A1P61619 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
SEC61A1P61619 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
SEC61A1P61619 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
SEC61A1P61619 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SEC61A1P61619 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.83□□□□□ -0.2
SEC61A1P61619 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 AC020658.6-201ENST00000623564 1870 ntBASIC13.83□□□□□ -0.2
SEC61A1P61619 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.83□□□□□ -0.2
SEC61A1P61619 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.83□□□□□ -0.2
SEC61A1P61619 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.83□□□□□ -0.2
SEC61A1P61619 FAM58DP-201ENST00000428076 619 ntBASIC13.83□□□□□ -0.2
SEC61A1P61619 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.83□□□□□ -0.2
SEC61A1P61619 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.83□□□□□ -0.2
SEC61A1P61619 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.83□□□□□ -0.2
SEC61A1P61619 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.83□□□□□ -0.2
SEC61A1P61619 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.83□□□□□ -0.2
SEC61A1P61619 AC106028.4-201ENST00000614509 607 ntBASIC13.83□□□□□ -0.2
SEC61A1P61619 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.83□□□□□ -0.2
SEC61A1P61619 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
SEC61A1P61619 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.83□□□□□ -0.2
SEC61A1P61619 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.83□□□□□ -0.2
SEC61A1P61619 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SEC61A1P61619 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.83□□□□□ -0.2
SEC61A1P61619 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SEC61A1P61619 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SEC61A1P61619 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SEC61A1P61619 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.83□□□□□ -0.2
SEC61A1P61619 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.83□□□□□ -0.2
SEC61A1P61619 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SEC61A1P61619 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.83□□□□□ -0.2
SEC61A1P61619 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SEC61A1P61619 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
SEC61A1P61619 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC61A1P61619 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.82□□□□□ -0.2
SEC61A1P61619 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SEC61A1P61619 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SEC61A1P61619 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.82□□□□□ -0.2
SEC61A1P61619 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.82□□□□□ -0.2
SEC61A1P61619 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.82□□□□□ -0.2
SEC61A1P61619 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.82□□□□□ -0.2
SEC61A1P61619 KRT18P32-201ENST00000424695 1287 ntBASIC13.82□□□□□ -0.2
SEC61A1P61619 RFPL4AP1-201ENST00000530883 850 ntBASIC13.82□□□□□ -0.2
SEC61A1P61619 AC004449.1-201ENST00000564240 433 ntBASIC13.82□□□□□ -0.2
SEC61A1P61619 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SEC61A1P61619 AC009093.7-201ENST00000623853 1223 ntBASIC13.82□□□□□ -0.2
SEC61A1P61619 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.82□□□□□ -0.2
SEC61A1P61619 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SEC61A1P61619 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
SEC61A1P61619 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.82□□□□□ -0.2
SEC61A1P61619 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SEC61A1P61619 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.82□□□□□ -0.2
SEC61A1P61619 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.82□□□□□ -0.2
SEC61A1P61619 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SEC61A1P61619 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.82□□□□□ -0.2
SEC61A1P61619 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms