Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
APOC4P55056 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC11.49□□□□□ -0.57
APOC4P55056 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
APOC4P55056 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
APOC4P55056 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.49□□□□□ -0.57
APOC4P55056 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC11.48□□□□□ -0.57
APOC4P55056 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC4P55056 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC4P55056 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC4P55056 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
APOC4P55056 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
APOC4P55056 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
APOC4P55056 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 AL662844.4-201ENST00000606367 2838 ntBASIC11.48□□□□□ -0.57
APOC4P55056 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC4P55056 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
APOC4P55056 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC4P55056 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 KRT43P-201ENST00000434019 910 ntBASIC11.48□□□□□ -0.57
APOC4P55056 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
APOC4P55056 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC11.48□□□□□ -0.57
APOC4P55056 PUDP-206ENST00000540122 825 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC4P55056 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.48□□□□□ -0.57
APOC4P55056 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC11.48□□□□□ -0.57
APOC4P55056 AL391069.4-201ENST00000609583 481 ntBASIC11.48□□□□□ -0.57
APOC4P55056 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC11.48□□□□□ -0.57
APOC4P55056 CU634019.7-201ENST00000624153 1185 ntBASIC11.48□□□□□ -0.57
APOC4P55056 FP236241.2-201ENST00000624906 1185 ntBASIC11.48□□□□□ -0.57
APOC4P55056 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
APOC4P55056 AL365209.1-201ENST00000624418 6473 ntBASIC11.48□□□□□ -0.57
APOC4P55056 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
APOC4P55056 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.48□□□□□ -0.57
APOC4P55056 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 CDC14C-201ENST00000428251 1719 ntBASIC11.48□□□□□ -0.57
APOC4P55056 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC4P55056 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC4P55056 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
APOC4P55056 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC4P55056 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 AC006449.5-201ENST00000610658 2098 ntBASIC11.48□□□□□ -0.57
APOC4P55056 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
APOC4P55056 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
APOC4P55056 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
APOC4P55056 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
APOC4P55056 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC11.48□□□□□ -0.57
APOC4P55056 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC4P55056 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
APOC4P55056 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.48□□□□□ -0.57
APOC4P55056 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
APOC4P55056 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
APOC4P55056 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC11.47□□□□□ -0.57
APOC4P55056 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
APOC4P55056 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC11.47□□□□□ -0.57
APOC4P55056 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
APOC4P55056 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
APOC4P55056 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC11.47□□□□□ -0.57
APOC4P55056 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.47□□□□□ -0.57
APOC4P55056 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
APOC4P55056 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 OR8S1-201ENST00000310194 1080 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms