Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
PMS1P54277 AL033527.5-202ENST00000641632 1098 ntBASIC17.25■□□□□ 0.35
PMS1P54277 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PMS1P54277 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PMS1P54277 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PMS1P54277 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PMS1P54277 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PMS1P54277 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PMS1P54277 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PMS1P54277 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PMS1P54277 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.24■□□□□ 0.35
PMS1P54277 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PMS1P54277 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.24■□□□□ 0.35
PMS1P54277 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.24■□□□□ 0.35
PMS1P54277 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PMS1P54277 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PMS1P54277 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.24■□□□□ 0.35
PMS1P54277 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PMS1P54277 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.24■□□□□ 0.35
PMS1P54277 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PMS1P54277 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PMS1P54277 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.24■□□□□ 0.35
PMS1P54277 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.24■□□□□ 0.35
PMS1P54277 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.24■□□□□ 0.35
PMS1P54277 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.24■□□□□ 0.35
PMS1P54277 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PMS1P54277 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PMS1P54277 LINC01115-203ENST00000606068 577 ntBASIC17.24■□□□□ 0.35
PMS1P54277 TEX28P1-201ENST00000613479 1221 ntBASIC17.24■□□□□ 0.35
PMS1P54277 AL138828.2-201ENST00000615812 383 ntBASIC17.24■□□□□ 0.35
PMS1P54277 TEX28P2-201ENST00000617764 1221 ntBASIC17.24■□□□□ 0.35
PMS1P54277 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PMS1P54277 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PMS1P54277 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PMS1P54277 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PMS1P54277 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PMS1P54277 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PMS1P54277 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PMS1P54277 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.23■□□□□ 0.35
PMS1P54277 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.23■□□□□ 0.35
PMS1P54277 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PMS1P54277 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.23■□□□□ 0.35
PMS1P54277 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.23■□□□□ 0.35
PMS1P54277 KRT18P13-201ENST00000400056 1290 ntBASIC17.23■□□□□ 0.35
PMS1P54277 TSEN15P1-201ENST00000423257 515 ntBASIC17.23■□□□□ 0.35
PMS1P54277 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
PMS1P54277 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.23■□□□□ 0.35
PMS1P54277 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.23■□□□□ 0.35
PMS1P54277 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PMS1P54277 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.23■□□□□ 0.35
PMS1P54277 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PMS1P54277 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PMS1P54277 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PMS1P54277 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PMS1P54277 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.22■□□□□ 0.35
PMS1P54277 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PMS1P54277 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PMS1P54277 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PMS1P54277 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PMS1P54277 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.22■□□□□ 0.35
PMS1P54277 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PMS1P54277 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PMS1P54277 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PMS1P54277 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PMS1P54277 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PMS1P54277 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.22■□□□□ 0.35
PMS1P54277 RPL13P2-201ENST00000440687 659 ntBASIC17.22■□□□□ 0.35
PMS1P54277 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.22■□□□□ 0.35
PMS1P54277 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.22■□□□□ 0.35
PMS1P54277 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms