Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.82■□□□□ 0.12
CHRNA4P43681 AC027796.2-201ENST00000575326 344 ntBASIC15.82■□□□□ 0.12
CHRNA4P43681 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.82■□□□□ 0.12
CHRNA4P43681 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CHRNA4P43681 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRNA4P43681 AC004461.2-201ENST00000629517 803 ntBASIC15.82■□□□□ 0.12
CHRNA4P43681 AC004840.1-201ENST00000636359 365 ntBASIC15.82■□□□□ 0.12
CHRNA4P43681 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA4P43681 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CHRNA4P43681 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRNA4P43681 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRNA4P43681 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA4P43681 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA4P43681 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRNA4P43681 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA4P43681 AC006486.2-201ENST00000624246 2199 ntBASIC15.82■□□□□ 0.12
CHRNA4P43681 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRNA4P43681 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA4P43681 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRNA4P43681 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CHRNA4P43681 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CHRNA4P43681 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA4P43681 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA4P43681 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CHRNA4P43681 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.81■□□□□ 0.12
CHRNA4P43681 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 AC015922.1-201ENST00000421102 1152 ntBASIC15.81■□□□□ 0.12
CHRNA4P43681 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.81■□□□□ 0.12
CHRNA4P43681 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA4P43681 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.81■□□□□ 0.12
CHRNA4P43681 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA4P43681 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CHRNA4P43681 ZNF890P-202ENST00000530367 1156 ntBASIC15.81■□□□□ 0.12
CHRNA4P43681 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
CHRNA4P43681 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA4P43681 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CHRNA4P43681 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA4P43681 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CHRNA4P43681 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CHRNA4P43681 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 MST1L-201ENST00000442552 2185 ntBASIC15.8■□□□□ 0.12
CHRNA4P43681 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHRNA4P43681 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRNA4P43681 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CHRNA4P43681 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRNA4P43681 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRNA4P43681 MRPS18AP1-201ENST00000414458 589 ntBASIC15.8■□□□□ 0.12
CHRNA4P43681 FAM8A3P-201ENST00000427218 844 ntBASIC15.8■□□□□ 0.12
CHRNA4P43681 AL589987.1-201ENST00000453380 819 ntBASIC15.8■□□□□ 0.12
CHRNA4P43681 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRNA4P43681 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.8■□□□□ 0.12
CHRNA4P43681 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA4P43681 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms