Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 C18orf15-201ENST00000623680 2534 ntBASIC15.57■□□□□ 0.08
HMGCLP35914 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
HMGCLP35914 AC073347.1-201ENST00000421633 2643 ntBASIC15.57■□□□□ 0.08
HMGCLP35914 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGCLP35914 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGCLP35914 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
HMGCLP35914 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
HMGCLP35914 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
HMGCLP35914 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGCLP35914 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGCLP35914 RN7SL399P-201ENST00000471648 279 ntBASIC15.57■□□□□ 0.08
HMGCLP35914 AC055876.2-201ENST00000531834 546 ntBASIC15.57■□□□□ 0.08
HMGCLP35914 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.57■□□□□ 0.08
HMGCLP35914 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.57■□□□□ 0.08
HMGCLP35914 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.57■□□□□ 0.08
HMGCLP35914 AC004233.3-201ENST00000607794 1269 ntBASIC15.57■□□□□ 0.08
HMGCLP35914 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGCLP35914 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGCLP35914 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGCLP35914 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGCLP35914 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCLP35914 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGCLP35914 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGCLP35914 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
HMGCLP35914 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HMGCLP35914 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
HMGCLP35914 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HMGCLP35914 AL353779.1-201ENST00000434793 351 ntBASIC15.56■□□□□ 0.08
HMGCLP35914 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.56■□□□□ 0.08
HMGCLP35914 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.56■□□□□ 0.08
HMGCLP35914 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGCLP35914 AC092364.2-202ENST00000597012 1073 ntBASIC15.56■□□□□ 0.08
HMGCLP35914 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.56■□□□□ 0.08
HMGCLP35914 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.56■□□□□ 0.08
HMGCLP35914 AL645728.2-202ENST00000641679 227 ntBASIC15.56■□□□□ 0.08
HMGCLP35914 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.56■□□□□ 0.08
HMGCLP35914 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGCLP35914 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.56■□□□□ 0.08
HMGCLP35914 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGCLP35914 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.56■□□□□ 0.08
HMGCLP35914 AC126177.1-201ENST00000547829 2218 ntBASIC15.56■□□□□ 0.08
HMGCLP35914 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGCLP35914 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
HMGCLP35914 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.56■□□□□ 0.08
HMGCLP35914 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCLP35914 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HMGCLP35914 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HMGCLP35914 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms