Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.25□□□□□ -0.29
COL8A2P25067 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
COL8A2P25067 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.25□□□□□ -0.29
COL8A2P25067 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
COL8A2P25067 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.25□□□□□ -0.29
COL8A2P25067 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.25□□□□□ -0.29
COL8A2P25067 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
COL8A2P25067 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
COL8A2P25067 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
COL8A2P25067 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.25□□□□□ -0.29
COL8A2P25067 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.25□□□□□ -0.29
COL8A2P25067 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.25□□□□□ -0.29
COL8A2P25067 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.25□□□□□ -0.29
COL8A2P25067 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.25□□□□□ -0.29
COL8A2P25067 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.25□□□□□ -0.29
COL8A2P25067 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.25□□□□□ -0.29
COL8A2P25067 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.25□□□□□ -0.29
COL8A2P25067 MIR4313-201ENST00000580760 101 ntBASIC13.25□□□□□ -0.29
COL8A2P25067 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.25□□□□□ -0.29
COL8A2P25067 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.25□□□□□ -0.29
COL8A2P25067 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
COL8A2P25067 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.25□□□□□ -0.29
COL8A2P25067 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
COL8A2P25067 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 LINC02447-202ENST00000501888 2146 ntBASIC13.25□□□□□ -0.29
COL8A2P25067 AL365203.3-201ENST00000609742 2057 ntBASIC13.25□□□□□ -0.29
COL8A2P25067 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.25□□□□□ -0.29
COL8A2P25067 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.25□□□□□ -0.29
COL8A2P25067 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
COL8A2P25067 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
COL8A2P25067 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL8A2P25067 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.25□□□□□ -0.29
COL8A2P25067 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.24□□□□□ -0.29
COL8A2P25067 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.24□□□□□ -0.29
COL8A2P25067 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
COL8A2P25067 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
COL8A2P25067 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.24□□□□□ -0.29
COL8A2P25067 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.24□□□□□ -0.29
COL8A2P25067 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.24□□□□□ -0.29
COL8A2P25067 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.24□□□□□ -0.29
COL8A2P25067 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.24□□□□□ -0.29
COL8A2P25067 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
COL8A2P25067 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
COL8A2P25067 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.24□□□□□ -0.29
COL8A2P25067 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
COL8A2P25067 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.24□□□□□ -0.29
COL8A2P25067 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.24□□□□□ -0.29
COL8A2P25067 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.24□□□□□ -0.29
COL8A2P25067 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.24□□□□□ -0.29
COL8A2P25067 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.24□□□□□ -0.29
COL8A2P25067 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.24□□□□□ -0.29
COL8A2P25067 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.24□□□□□ -0.29
COL8A2P25067 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.24□□□□□ -0.29
COL8A2P25067 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.24□□□□□ -0.29
COL8A2P25067 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.24□□□□□ -0.29
COL8A2P25067 AC133539.2-201ENST00000604757 467 ntBASIC13.24□□□□□ -0.29
COL8A2P25067 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.24□□□□□ -0.29
COL8A2P25067 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
COL8A2P25067 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.24□□□□□ -0.29
COL8A2P25067 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL8A2P25067 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
COL8A2P25067 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms