Protein–RNA interactions for Protein: P13637

ATP1A3, Sodium/potassium-transporting ATPase subunit alpha-3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3P13637 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A3P13637 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATP1A3P13637 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ATP1A3P13637 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP1A3P13637 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP1A3P13637 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP1A3P13637 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
ATP1A3P13637 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP1A3P13637 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP1A3P13637 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP1A3P13637 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATP1A3P13637 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP1A3P13637 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP1A3P13637 KRT18P3-201ENST00000451602 1288 ntBASIC17.3■□□□□ 0.36
ATP1A3P13637 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATP1A3P13637 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP1A3P13637 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP1A3P13637 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP1A3P13637 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP1A3P13637 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ATP1A3P13637 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ATP1A3P13637 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ATP1A3P13637 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ATP1A3P13637 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP1A3P13637 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ATP1A3P13637 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A3P13637 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.29■□□□□ 0.36
ATP1A3P13637 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ATP1A3P13637 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ATP1A3P13637 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 AC084364.1-201ENST00000551967 1556 ntBASIC17.29■□□□□ 0.36
ATP1A3P13637 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP1A3P13637 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP1A3P13637 AC023274.1-201ENST00000418278 595 ntBASIC17.29■□□□□ 0.36
ATP1A3P13637 MED15P5-201ENST00000423150 992 ntBASIC17.29■□□□□ 0.36
ATP1A3P13637 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.29■□□□□ 0.36
ATP1A3P13637 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.29■□□□□ 0.36
ATP1A3P13637 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.29■□□□□ 0.36
ATP1A3P13637 RN7SL589P-201ENST00000481268 310 ntBASIC17.29■□□□□ 0.36
ATP1A3P13637 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
ATP1A3P13637 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP1A3P13637 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP1A3P13637 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP1A3P13637 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP1A3P13637 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP1A3P13637 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A3P13637 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms