Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PDGFAP04085 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.75□□□□□ -0.05
PDGFAP04085 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFAP04085 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFAP04085 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
PDGFAP04085 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFAP04085 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PDGFAP04085 AC079328.2-201ENST00000561241 3354 ntBASIC14.74□□□□□ -0.05
PDGFAP04085 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PDGFAP04085 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.74□□□□□ -0.05
PDGFAP04085 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.74□□□□□ -0.05
PDGFAP04085 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.74□□□□□ -0.05
PDGFAP04085 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 AC018665.1-201ENST00000622927 1362 ntBASIC14.74□□□□□ -0.05
PDGFAP04085 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.74□□□□□ -0.05
PDGFAP04085 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.74□□□□□ -0.05
PDGFAP04085 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.74□□□□□ -0.05
PDGFAP04085 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.74□□□□□ -0.05
PDGFAP04085 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.74□□□□□ -0.05
PDGFAP04085 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PDGFAP04085 AC104596.2-201ENST00000512793 793 ntBASIC14.74□□□□□ -0.05
PDGFAP04085 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PDGFAP04085 GPR182-203ENST00000622922 591 ntBASIC14.74□□□□□ -0.05
PDGFAP04085 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PDGFAP04085 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.74□□□□□ -0.05
PDGFAP04085 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.74□□□□□ -0.05
PDGFAP04085 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PDGFAP04085 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
PDGFAP04085 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFAP04085 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PDGFAP04085 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.73□□□□□ -0.05
PDGFAP04085 AC093525.8-201ENST00000624099 1342 ntBASIC14.73□□□□□ -0.05
PDGFAP04085 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PDGFAP04085 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.73□□□□□ -0.05
PDGFAP04085 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PDGFAP04085 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PDGFAP04085 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PDGFAP04085 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 BOLA2P3-201ENST00000404566 256 ntBASIC14.73□□□□□ -0.05
PDGFAP04085 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PDGFAP04085 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.73□□□□□ -0.05
PDGFAP04085 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.73□□□□□ -0.05
PDGFAP04085 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.73□□□□□ -0.05
PDGFAP04085 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.73□□□□□ -0.05
PDGFAP04085 FAM8A2P-201ENST00000528813 1142 ntBASIC14.73□□□□□ -0.05
PDGFAP04085 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
PDGFAP04085 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.73□□□□□ -0.05
PDGFAP04085 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.73□□□□□ -0.05
PDGFAP04085 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.73□□□□□ -0.05
PDGFAP04085 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC14.73□□□□□ -0.05
PDGFAP04085 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.73□□□□□ -0.05
PDGFAP04085 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PDGFAP04085 LINC01115-203ENST00000606068 577 ntBASIC14.73□□□□□ -0.05
PDGFAP04085 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PDGFAP04085 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PDGFAP04085 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.73□□□□□ -0.05
PDGFAP04085 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFAP04085 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PDGFAP04085 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms