Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HLA-DRAP01903 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HLA-DRAP01903 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DRAP01903 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DRAP01903 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DRAP01903 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DRAP01903 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 TPRX2P-201ENST00000535362 881 ntBASIC16.83■□□□□ 0.28
HLA-DRAP01903 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DRAP01903 AC126177.1-201ENST00000547829 2218 ntBASIC16.83■□□□□ 0.28
HLA-DRAP01903 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 AC009118.2-201ENST00000613275 655 ntBASIC16.83■□□□□ 0.28
HLA-DRAP01903 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DRAP01903 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DRAP01903 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DRAP01903 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DRAP01903 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DRAP01903 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DRAP01903 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DRAP01903 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DRAP01903 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DRAP01903 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 CLK3P2-201ENST00000427566 1453 ntBASIC16.82■□□□□ 0.28
HLA-DRAP01903 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 RN7SL204P-201ENST00000582831 262 ntBASIC16.82■□□□□ 0.28
HLA-DRAP01903 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DRAP01903 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DRAP01903 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HLA-DRAP01903 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DRAP01903 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DRAP01903 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRAP01903 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DRAP01903 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms