Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH16O75309 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH16O75309 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH16O75309 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH16O75309 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH16O75309 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH16O75309 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH16O75309 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH16O75309 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH16O75309 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH16O75309 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH16O75309 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.9■□□□□ 0.14
CDH16O75309 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.9■□□□□ 0.14
CDH16O75309 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH16O75309 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.9■□□□□ 0.14
CDH16O75309 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH16O75309 UNC93B6-202ENST00000528242 690 ntBASIC15.9■□□□□ 0.14
CDH16O75309 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH16O75309 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH16O75309 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CDH16O75309 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH16O75309 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.9■□□□□ 0.14
CDH16O75309 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.9■□□□□ 0.14
CDH16O75309 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH16O75309 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH16O75309 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH16O75309 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CDH16O75309 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH16O75309 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CDH16O75309 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH16O75309 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH16O75309 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH16O75309 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH16O75309 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH16O75309 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH16O75309 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH16O75309 AC097376.2-205ENST00000610159 5334 ntBASIC15.9■□□□□ 0.14
CDH16O75309 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH16O75309 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH16O75309 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDH16O75309 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH16O75309 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 MRPL3P1-201ENST00000400109 1033 ntBASIC15.89■□□□□ 0.13
CDH16O75309 RPL5P21-201ENST00000404620 815 ntBASIC15.89■□□□□ 0.13
CDH16O75309 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH16O75309 PHKG1P2-201ENST00000457537 863 ntBASIC15.89■□□□□ 0.13
CDH16O75309 AC092910.1-201ENST00000482027 1129 ntBASIC15.89■□□□□ 0.13
CDH16O75309 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH16O75309 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH16O75309 SPTSSB-204ENST00000617024 1292 ntBASIC15.89■□□□□ 0.13
CDH16O75309 FAM215A-202ENST00000632077 792 ntBASIC15.89■□□□□ 0.13
CDH16O75309 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CDH16O75309 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CDH16O75309 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 HLA-A-201ENST00000376802 1334 ntBASIC15.89■□□□□ 0.13
CDH16O75309 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH16O75309 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CDH16O75309 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH16O75309 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH16O75309 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
CDH16O75309 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDH16O75309 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH16O75309 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CDH16O75309 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH16O75309 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 KRT8P37-201ENST00000451609 1420 ntBASIC15.88■□□□□ 0.13
CDH16O75309 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH16O75309 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH16O75309 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH16O75309 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms