Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.69□□□□□ -0.22
XRCC2O43543 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
XRCC2O43543 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 AC097359.3-201ENST00000603982 1210 ntBASIC13.69□□□□□ -0.22
XRCC2O43543 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.69□□□□□ -0.22
XRCC2O43543 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.69□□□□□ -0.22
XRCC2O43543 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.69□□□□□ -0.22
XRCC2O43543 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.69□□□□□ -0.22
XRCC2O43543 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.69□□□□□ -0.22
XRCC2O43543 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.69□□□□□ -0.22
XRCC2O43543 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
XRCC2O43543 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 AC127383.1-201ENST00000444697 1800 ntBASIC13.69□□□□□ -0.22
XRCC2O43543 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.68□□□□□ -0.22
XRCC2O43543 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
XRCC2O43543 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.68□□□□□ -0.22
XRCC2O43543 AC136621.1-201ENST00000624017 2304 ntBASIC13.68□□□□□ -0.22
XRCC2O43543 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.68□□□□□ -0.22
XRCC2O43543 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.68□□□□□ -0.22
XRCC2O43543 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.68□□□□□ -0.22
XRCC2O43543 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
XRCC2O43543 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
XRCC2O43543 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.68□□□□□ -0.22
XRCC2O43543 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.68□□□□□ -0.22
XRCC2O43543 AC069262.1-201ENST00000539058 672 ntBASIC13.68□□□□□ -0.22
XRCC2O43543 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
XRCC2O43543 AL589739.1-201ENST00000607720 493 ntBASIC13.68□□□□□ -0.22
XRCC2O43543 AL596442.2-201ENST00000610240 980 ntBASIC13.68□□□□□ -0.22
XRCC2O43543 MIR6069-201ENST00000620069 79 ntBASIC13.68□□□□□ -0.22
XRCC2O43543 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
XRCC2O43543 LINC00628-201ENST00000628516 1289 ntBASIC13.68□□□□□ -0.22
XRCC2O43543 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.68□□□□□ -0.22
XRCC2O43543 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.68□□□□□ -0.22
XRCC2O43543 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.68□□□□□ -0.22
XRCC2O43543 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
XRCC2O43543 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
XRCC2O43543 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
XRCC2O43543 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.67□□□□□ -0.22
XRCC2O43543 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.67□□□□□ -0.22
XRCC2O43543 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.67□□□□□ -0.22
XRCC2O43543 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 PPT1-215ENST00000641471 2368 ntBASIC13.67□□□□□ -0.22
XRCC2O43543 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
XRCC2O43543 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
XRCC2O43543 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.67□□□□□ -0.22
XRCC2O43543 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.67□□□□□ -0.22
XRCC2O43543 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
XRCC2O43543 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
XRCC2O43543 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
XRCC2O43543 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 CNN2P2-201ENST00000443536 909 ntBASIC13.67□□□□□ -0.22
XRCC2O43543 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms