Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
UPK2O00526 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UPK2O00526 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UPK2O00526 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.61□□□□□ -0.39
UPK2O00526 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UPK2O00526 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.61□□□□□ -0.39
UPK2O00526 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.61□□□□□ -0.39
UPK2O00526 BANF1P1-201ENST00000553684 263 ntBASIC12.61□□□□□ -0.39
UPK2O00526 AC003101.2-201ENST00000612557 442 ntBASIC12.61□□□□□ -0.39
UPK2O00526 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK2O00526 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK2O00526 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
UPK2O00526 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.61□□□□□ -0.39
UPK2O00526 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.61□□□□□ -0.39
UPK2O00526 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.61□□□□□ -0.39
UPK2O00526 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
UPK2O00526 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
UPK2O00526 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK2O00526 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK2O00526 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UPK2O00526 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.61□□□□□ -0.39
UPK2O00526 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
UPK2O00526 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK2O00526 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK2O00526 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
UPK2O00526 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK2O00526 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UPK2O00526 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
UPK2O00526 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
UPK2O00526 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.6□□□□□ -0.39
UPK2O00526 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
UPK2O00526 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.6□□□□□ -0.39
UPK2O00526 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.6□□□□□ -0.39
UPK2O00526 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
UPK2O00526 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
UPK2O00526 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.6□□□□□ -0.39
UPK2O00526 FAM45BP-202ENST00000592932 1624 ntBASIC12.6□□□□□ -0.39
UPK2O00526 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
UPK2O00526 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
UPK2O00526 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.6□□□□□ -0.39
UPK2O00526 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.6□□□□□ -0.39
UPK2O00526 FAM58DP-201ENST00000428076 619 ntBASIC12.6□□□□□ -0.39
UPK2O00526 DNAJB3-201ENST00000446806 729 ntBASIC12.6□□□□□ -0.39
UPK2O00526 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.6□□□□□ -0.39
UPK2O00526 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.6□□□□□ -0.39
UPK2O00526 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.6□□□□□ -0.39
UPK2O00526 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.6□□□□□ -0.39
UPK2O00526 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.6□□□□□ -0.39
UPK2O00526 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.6□□□□□ -0.39
UPK2O00526 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.6□□□□□ -0.39
UPK2O00526 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 AL513210.1-201ENST00000629608 234 ntBASIC12.6□□□□□ -0.39
UPK2O00526 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
UPK2O00526 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.6□□□□□ -0.39
UPK2O00526 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
UPK2O00526 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.6□□□□□ -0.39
UPK2O00526 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.6□□□□□ -0.39
UPK2O00526 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
UPK2O00526 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.6□□□□□ -0.39
UPK2O00526 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
UPK2O00526 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.6□□□□□ -0.39
UPK2O00526 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.6□□□□□ -0.39
UPK2O00526 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK2O00526 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.6□□□□□ -0.39
UPK2O00526 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.6□□□□□ -0.39
UPK2O00526 OR2I1P-210ENST00000642037 4691 ntBASIC12.59□□□□□ -0.39
UPK2O00526 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.59□□□□□ -0.39
UPK2O00526 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.59□□□□□ -0.39
UPK2O00526 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
UPK2O00526 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UPK2O00526 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms