Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AL360270.3-201ENST00000609118 1348 ntBASIC22.82■■□□□ 1.24
HFM1A2PYH4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HFM1A2PYH4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC22.82■■□□□ 1.24
HFM1A2PYH4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HFM1A2PYH4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HFM1A2PYH4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HFM1A2PYH4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC22.82■■□□□ 1.24
HFM1A2PYH4 AL157414.3-201ENST00000624276 1954 ntBASIC22.82■■□□□ 1.24
HFM1A2PYH4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HFM1A2PYH4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC22.82■■□□□ 1.24
HFM1A2PYH4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HFM1A2PYH4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HFM1A2PYH4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HFM1A2PYH4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HFM1A2PYH4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC22.82■■□□□ 1.24
HFM1A2PYH4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HFM1A2PYH4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
HFM1A2PYH4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
HFM1A2PYH4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HFM1A2PYH4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
HFM1A2PYH4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
HFM1A2PYH4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HFM1A2PYH4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC22.82■■□□□ 1.24
HFM1A2PYH4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC22.82■■□□□ 1.24
HFM1A2PYH4 AC078819.1-201ENST00000547454 765 ntBASIC22.82■■□□□ 1.24
HFM1A2PYH4 AC012085.1-201ENST00000548270 765 ntBASIC22.82■■□□□ 1.24
HFM1A2PYH4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC22.82■■□□□ 1.24
HFM1A2PYH4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
HFM1A2PYH4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC22.82■■□□□ 1.24
HFM1A2PYH4 AL606495.2-201ENST00000605867 535 ntBASIC22.82■■□□□ 1.24
HFM1A2PYH4 AC133552.6-201ENST00000613406 534 ntBASIC22.82■■□□□ 1.24
HFM1A2PYH4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC22.82■■□□□ 1.24
HFM1A2PYH4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
HFM1A2PYH4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
HFM1A2PYH4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HFM1A2PYH4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HFM1A2PYH4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
HFM1A2PYH4 AC023024.2-201ENST00000623561 1993 ntBASIC22.81■■□□□ 1.24
HFM1A2PYH4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
HFM1A2PYH4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HFM1A2PYH4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
HFM1A2PYH4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HFM1A2PYH4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC22.81■■□□□ 1.24
HFM1A2PYH4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HFM1A2PYH4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
HFM1A2PYH4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HFM1A2PYH4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC22.81■■□□□ 1.24
HFM1A2PYH4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
HFM1A2PYH4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC22.81■■□□□ 1.24
HFM1A2PYH4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC22.81■■□□□ 1.24
HFM1A2PYH4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
HFM1A2PYH4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC22.81■■□□□ 1.24
HFM1A2PYH4 AP003171.2-201ENST00000528208 925 ntBASIC22.81■■□□□ 1.24
HFM1A2PYH4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC22.81■■□□□ 1.24
HFM1A2PYH4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC22.81■■□□□ 1.24
HFM1A2PYH4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
HFM1A2PYH4 ECM1P1-201ENST00000604092 1279 ntBASIC22.81■■□□□ 1.24
HFM1A2PYH4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC22.81■■□□□ 1.24
HFM1A2PYH4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HFM1A2PYH4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
HFM1A2PYH4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC22.8■■□□□ 1.24
HFM1A2PYH4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
HFM1A2PYH4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
HFM1A2PYH4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
HFM1A2PYH4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HFM1A2PYH4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HFM1A2PYH4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
HFM1A2PYH4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HFM1A2PYH4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
HFM1A2PYH4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
HFM1A2PYH4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HFM1A2PYH4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HFM1A2PYH4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
HFM1A2PYH4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC22.8■■□□□ 1.24
HFM1A2PYH4 AC006001.1-201ENST00000325130 474 ntBASIC22.8■■□□□ 1.24
HFM1A2PYH4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC22.8■■□□□ 1.24
HFM1A2PYH4 POM121L8P-201ENST00000417732 1281 ntBASIC22.8■■□□□ 1.24
HFM1A2PYH4 AC026954.1-201ENST00000429771 1293 ntBASIC22.8■■□□□ 1.24
HFM1A2PYH4 POM121L9P-203ENST00000441984 1285 ntBASIC22.8■■□□□ 1.24
HFM1A2PYH4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
HFM1A2PYH4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC22.8■■□□□ 1.24
HFM1A2PYH4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC22.8■■□□□ 1.24
HFM1A2PYH4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
HFM1A2PYH4 AC138951.2-201ENST00000623455 1161 ntBASIC22.8■■□□□ 1.24
HFM1A2PYH4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
HFM1A2PYH4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
HFM1A2PYH4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
HFM1A2PYH4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
HFM1A2PYH4 AP000845.1-201ENST00000581677 2131 ntBASIC22.79■■□□□ 1.24
HFM1A2PYH4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC22.79■■□□□ 1.24
HFM1A2PYH4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HFM1A2PYH4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC22.79■■□□□ 1.24
HFM1A2PYH4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HFM1A2PYH4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HFM1A2PYH4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
HFM1A2PYH4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
HFM1A2PYH4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
HFM1A2PYH4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC22.79■■□□□ 1.24
HFM1A2PYH4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HFM1A2PYH4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms