Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 AC105250.1-201ENST00000509378 2057 ntBASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 AC092850.2-201ENST00000623821 2697 ntBASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 HIST3H2BA-201ENST00000436555 524 ntBASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 ZNF890P-202ENST00000530367 1156 ntBASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 MIR6069-201ENST00000620069 79 ntBASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 AC068587.6-202ENST00000641839 5619 ntBASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 AC087481.3-201ENST00000602886 1894 ntBASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 MIR658-201ENST00000385210 100 ntBASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 AC011495.1-201ENST00000498085 584 ntBASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 AC093004.1-201ENST00000508850 424 ntBASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 KRT17P8-201ENST00000540749 863 ntBASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 MIR6805-201ENST00000615055 62 ntBASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHB1Q9Y5F3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms