Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 FGFR3P6-201ENST00000457012 610 ntBASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 AC025062.2-201ENST00000605477 670 ntBASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RCL1Q9Y2P8 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 PCED1CP-201ENST00000419887 785 ntBASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 MIR4313-201ENST00000580760 101 ntBASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 ACTL9-202ENST00000612068 1252 ntBASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.9□□□□□ -0.34
RCL1Q9Y2P8 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
RCL1Q9Y2P8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.9□□□□□ -0.35
RCL1Q9Y2P8 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
RCL1Q9Y2P8 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.9□□□□□ -0.35
RCL1Q9Y2P8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RCL1Q9Y2P8 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms