Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 AC092850.2-201ENST00000623821 2697 ntBASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 SNX29P1-201ENST00000548357 1007 ntBASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC20.21■□□□□ 0.83
PDZRN3Q9UPQ7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 DKFZP434H168-201ENST00000567381 1905 ntBASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 AC092552.1-201ENST00000547243 906 ntBASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 AC084346.2-201ENST00000607097 949 ntBASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PDZRN3Q9UPQ7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 ACTBP11-201ENST00000436287 1126 ntBASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDZRN3Q9UPQ7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms