Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRM3Q9HC36 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRM3Q9HC36 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRM3Q9HC36 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 TOMM22P5-201ENST00000416399 439 ntBASIC15.69■□□□□ 0.1
MRM3Q9HC36 HMGN1P19-201ENST00000436976 333 ntBASIC15.69■□□□□ 0.1
MRM3Q9HC36 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 KLF2P3-201ENST00000451977 1087 ntBASIC15.69■□□□□ 0.1
MRM3Q9HC36 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 AC125807.1-201ENST00000483097 614 ntBASIC15.69■□□□□ 0.1
MRM3Q9HC36 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 ZNF890P-202ENST00000530367 1156 ntBASIC15.69■□□□□ 0.1
MRM3Q9HC36 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRM3Q9HC36 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 AC140878.1-201ENST00000565277 250 ntBASIC15.69■□□□□ 0.1
MRM3Q9HC36 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRM3Q9HC36 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRM3Q9HC36 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRM3Q9HC36 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRM3Q9HC36 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRM3Q9HC36 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRM3Q9HC36 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRM3Q9HC36 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRM3Q9HC36 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 FER1L4-210ENST00000615531 5998 ntBASIC15.69■□□□□ 0.1
MRM3Q9HC36 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRM3Q9HC36 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRM3Q9HC36 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.69■□□□□ 0.1
MRM3Q9HC36 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.68■□□□□ 0.1
MRM3Q9HC36 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 AGAP7P-201ENST00000582299 2062 ntBASIC15.68■□□□□ 0.1
MRM3Q9HC36 AGAP14-201ENST00000624701 2060 ntBASIC15.68■□□□□ 0.1
MRM3Q9HC36 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
MRM3Q9HC36 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
MRM3Q9HC36 WASH3P-207ENST00000560956 1394 ntBASIC15.68■□□□□ 0.1
MRM3Q9HC36 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.68■□□□□ 0.1
MRM3Q9HC36 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
MRM3Q9HC36 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 GHSR-202ENST00000427970 912 ntBASIC15.68■□□□□ 0.1
MRM3Q9HC36 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.68■□□□□ 0.1
MRM3Q9HC36 KRT18P64-201ENST00000434946 1219 ntBASIC15.68■□□□□ 0.1
MRM3Q9HC36 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.68■□□□□ 0.1
MRM3Q9HC36 AC067863.1-201ENST00000494933 530 ntBASIC15.68■□□□□ 0.1
MRM3Q9HC36 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.68■□□□□ 0.1
MRM3Q9HC36 SDHAP3-202ENST00000515467 728 ntBASIC15.68■□□□□ 0.1
MRM3Q9HC36 AC069120.2-201ENST00000524091 540 ntBASIC15.68■□□□□ 0.1
MRM3Q9HC36 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
MRM3Q9HC36 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.68■□□□□ 0.1
MRM3Q9HC36 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.68■□□□□ 0.1
MRM3Q9HC36 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.68■□□□□ 0.1
MRM3Q9HC36 AL645728.2-202ENST00000641679 227 ntBASIC15.68■□□□□ 0.1
MRM3Q9HC36 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.68■□□□□ 0.1
MRM3Q9HC36 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.68■□□□□ 0.1
MRM3Q9HC36 DBET-201ENST00000630918 3363 ntBASIC15.68■□□□□ 0.1
MRM3Q9HC36 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
MRM3Q9HC36 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MRM3Q9HC36 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MRM3Q9HC36 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.68■□□□□ 0.1
MRM3Q9HC36 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRM3Q9HC36 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
MRM3Q9HC36 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRM3Q9HC36 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms