Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 MIR5189-201ENST00000577370 114 ntBASIC16.86■□□□□ 0.29
SNX27Q96L92 AC008735.3-201ENST00000596646 500 ntBASIC16.86■□□□□ 0.29
SNX27Q96L92 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.86■□□□□ 0.29
SNX27Q96L92 AC107373.2-201ENST00000607735 490 ntBASIC16.86■□□□□ 0.29
SNX27Q96L92 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX27Q96L92 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.86■□□□□ 0.29
SNX27Q96L92 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX27Q96L92 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX27Q96L92 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.86■□□□□ 0.29
SNX27Q96L92 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX27Q96L92 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.86■□□□□ 0.29
SNX27Q96L92 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SNX27Q96L92 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
SNX27Q96L92 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SNX27Q96L92 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SNX27Q96L92 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.85■□□□□ 0.29
SNX27Q96L92 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX27Q96L92 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SNX27Q96L92 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.85■□□□□ 0.29
SNX27Q96L92 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.85■□□□□ 0.29
SNX27Q96L92 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SNX27Q96L92 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX27Q96L92 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SNX27Q96L92 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.85■□□□□ 0.29
SNX27Q96L92 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNX27Q96L92 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX27Q96L92 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX27Q96L92 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX27Q96L92 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX27Q96L92 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX27Q96L92 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.85■□□□□ 0.29
SNX27Q96L92 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.85■□□□□ 0.29
SNX27Q96L92 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
SNX27Q96L92 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.85■□□□□ 0.29
SNX27Q96L92 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.85■□□□□ 0.29
SNX27Q96L92 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.85■□□□□ 0.29
SNX27Q96L92 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX27Q96L92 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.85■□□□□ 0.29
SNX27Q96L92 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.85■□□□□ 0.29
SNX27Q96L92 AC015936.2-201ENST00000593177 259 ntBASIC16.85■□□□□ 0.29
SNX27Q96L92 AC133552.6-201ENST00000613406 534 ntBASIC16.85■□□□□ 0.29
SNX27Q96L92 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.85■□□□□ 0.29
SNX27Q96L92 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNX27Q96L92 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNX27Q96L92 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.85■□□□□ 0.29
SNX27Q96L92 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
SNX27Q96L92 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SNX27Q96L92 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX27Q96L92 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SNX27Q96L92 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX27Q96L92 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.85■□□□□ 0.29
SNX27Q96L92 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX27Q96L92 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SNX27Q96L92 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNX27Q96L92 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNX27Q96L92 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.85■□□□□ 0.29
SNX27Q96L92 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SNX27Q96L92 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX27Q96L92 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX27Q96L92 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX27Q96L92 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX27Q96L92 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 AC092127.1-201ENST00000567093 3455 ntBASIC16.84■□□□□ 0.29
SNX27Q96L92 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SNX27Q96L92 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX27Q96L92 AC099548.2-209ENST00000480264 625 ntBASIC16.84■□□□□ 0.29
SNX27Q96L92 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.84■□□□□ 0.29
SNX27Q96L92 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 AC119751.2-201ENST00000504529 210 ntBASIC16.84■□□□□ 0.29
SNX27Q96L92 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.84■□□□□ 0.29
SNX27Q96L92 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 ENPP7P5-201ENST00000541031 1031 ntBASIC16.84■□□□□ 0.29
SNX27Q96L92 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.84■□□□□ 0.29
SNX27Q96L92 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX27Q96L92 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.84■□□□□ 0.29
SNX27Q96L92 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.84■□□□□ 0.29
SNX27Q96L92 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.84■□□□□ 0.29
SNX27Q96L92 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 AC092850.2-201ENST00000623821 2697 ntBASIC16.84■□□□□ 0.29
SNX27Q96L92 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX27Q96L92 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms