Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.87■□□□□ 0.45
ERCC4Q92889 OR2I1P-209ENST00000641730 5365 ntBASIC17.87■□□□□ 0.45
ERCC4Q92889 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.87■□□□□ 0.45
ERCC4Q92889 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
ERCC4Q92889 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.87■□□□□ 0.45
ERCC4Q92889 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.87■□□□□ 0.45
ERCC4Q92889 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.87■□□□□ 0.45
ERCC4Q92889 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.87■□□□□ 0.45
ERCC4Q92889 SPCS2P4-201ENST00000436160 681 ntBASIC17.87■□□□□ 0.45
ERCC4Q92889 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.87■□□□□ 0.45
ERCC4Q92889 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.87■□□□□ 0.45
ERCC4Q92889 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.87■□□□□ 0.45
ERCC4Q92889 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ERCC4Q92889 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.87■□□□□ 0.45
ERCC4Q92889 BX640515.1-201ENST00000617215 977 ntBASIC17.87■□□□□ 0.45
ERCC4Q92889 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
ERCC4Q92889 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.87■□□□□ 0.45
ERCC4Q92889 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
ERCC4Q92889 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.87■□□□□ 0.45
ERCC4Q92889 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.87■□□□□ 0.45
ERCC4Q92889 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 AC139749.1-202ENST00000617529 3139 ntBASIC17.87■□□□□ 0.45
ERCC4Q92889 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC4Q92889 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.87■□□□□ 0.45
ERCC4Q92889 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.87■□□□□ 0.45
ERCC4Q92889 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
ERCC4Q92889 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ERCC4Q92889 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.86■□□□□ 0.45
ERCC4Q92889 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.86■□□□□ 0.45
ERCC4Q92889 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 RPS8P6-201ENST00000426177 609 ntBASIC17.86■□□□□ 0.45
ERCC4Q92889 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.86■□□□□ 0.45
ERCC4Q92889 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.86■□□□□ 0.45
ERCC4Q92889 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ERCC4Q92889 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.86■□□□□ 0.45
ERCC4Q92889 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.86■□□□□ 0.45
ERCC4Q92889 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.86■□□□□ 0.45
ERCC4Q92889 LINC01225-203ENST00000563550 1244 ntBASIC17.86■□□□□ 0.45
ERCC4Q92889 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.86■□□□□ 0.45
ERCC4Q92889 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.86■□□□□ 0.45
ERCC4Q92889 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.86■□□□□ 0.45
ERCC4Q92889 AKAP8P1-201ENST00000434743 1349 ntBASIC17.86■□□□□ 0.45
ERCC4Q92889 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.86■□□□□ 0.45
ERCC4Q92889 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 CYP4F24P-201ENST00000586049 1580 ntBASIC17.86■□□□□ 0.45
ERCC4Q92889 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.86■□□□□ 0.45
ERCC4Q92889 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC4Q92889 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC4Q92889 SBF1P1-201ENST00000444527 5631 ntBASIC17.85■□□□□ 0.45
ERCC4Q92889 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ERCC4Q92889 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.85■□□□□ 0.45
ERCC4Q92889 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
ERCC4Q92889 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.85■□□□□ 0.45
ERCC4Q92889 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC4Q92889 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC4Q92889 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ERCC4Q92889 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC4Q92889 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC4Q92889 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC4Q92889 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC4Q92889 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC4Q92889 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC4Q92889 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ERCC4Q92889 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC4Q92889 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC4Q92889 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ERCC4Q92889 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
ERCC4Q92889 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
ERCC4Q92889 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.85■□□□□ 0.45
ERCC4Q92889 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms